DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and inft-2

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_506253.4 Gene:inft-2 / 179786 WormBaseID:WBGene00008848 Length:1120 Species:Caenorhabditis elegans


Alignment Length:1203 Identity:249/1203 - (20%)
Similarity:409/1203 - (33%) Gaps:393/1203 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   359 SSRFTAAVTQTPPGVTSSTPNESGVTGPAGPLGATTSSPS---------------LETQSTVIIS 408
            :|:.:..:.|.|....:.||..|..:.|...|    |:||               ...|...:..
 Worm     7 NSKKSHRINQPPGSTKAKTPPFSDGSRPTSRL----SNPSDVENAGHADVPSKTKCNAQKPQVFG 67

  Fly   409 FKSSQTPVQSQTNSAASENVEDDTAPLPLPPPPPGF------GTPTTPLLSSNV----------- 456
            .||||..:.::..|..:.::.          |.|..      ..|.:.:.||.:           
 Worm    68 NKSSQLNIAAKPRSNGAHSIS----------PEPNVSERCVDSLPVSSISSSRLDDTDVHIREMI 122

  Fly   457 -------------LKKVAS--------------FTVEK--------SSAGNNSSNPPNLCPTSDE 486
                         ||.:|.              ||:.|        |:...::...|......:|
 Worm   123 SEFRDEIGEETTRLKAIADINYMIGSTSSFFQRFTIRKKLHSYGFLSALAAHADRSPQSKAIDEE 187

  Fly   487 TTLLATPCSSSLTVATL------PPEIAVGAAAGGVAGGAGSRRGSSYVPEKLSFAAYEKFEGQM 545
            ..:.....|....:..|      |.||.                  :.:..|.|...:|.|.|  
 Worm   188 VNMYLQSESRDARIMGLHDDNSQPIEIL------------------TRILSKTSDQQWENFIG-- 232

  Fly   546 LIKWLISTMQSNP---KSSSG------------------DANQELFNTLALQFCNNLKYVGVLKQ 589
                |:.|::.:.   .|.||                  |..|...|....:...|  :.|:.::
 Worm   233 ----LLETIEKSTDIGASISGLRVSCSSNVLTKDSETQTDVVQRKLNKERREPSRN--FHGIPEE 291

  Fly   590 ISNEHLDCGFSPYEMYQWTHTEQPTTSLPLTPGKLD---KVAAWPFSSTPSGIRALESASLASLG 651
            .:   :.|.:|..:......:..||     ||..:|   .:..|        :.|::..:.:.:|
 Worm   292 SA---VFCDYSTSDDESKLSSPDPT-----TPNSIDSNINLKKW--------MTAMDLPAQSQIG 340

  Fly   652 AGGVAGSLATIATASTASSDNQKTLQQILKKRLLNCTTLAEVHAVVNELLSSVDEPPRRPSKRCV 716
             |..|...:..:| ||.|||:...|..:      :.|||    .|:.|:||       ..::.|.
 Worm   341 -GNHAFFQSNFST-STFSSDDDGPLSPV------HDTTL----QVITEVLS-------EEAESCE 386

  Fly   717 NLTELLNASEATVYEYNKTGAEGCVKSFTDAETQTESEDCEGTCKCGQSSTKVSDNESAKEDGEK 781
            ..|. |.||.:.|:. :|...     :|.|..|.....|..|      .|..::.:....|.|:.
 Worm   387 MHTG-LEASPSAVFP-DKANI-----AFIDESTSASPLDGLG------FSDILTMSFEMIETGKM 438

  Fly   782 PHAVAP-----PPPPPPP----PLHAFVAPPP------------PPPPPP-----------PPPP 814
            ..|:||     ||||.||    ||....||||            ||||||           ||||
 Worm   439 NSAIAPINANAPPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPPPP 503

  Fly   815 PL-----ANYGAPPPPPPPPPG-SGSAPPPPPPAPIE-------------GGGGIPPPPPPMS-- 858
            |:     .:.|||.||||||.| :...||||||.|::             ||...||||||.|  
 Worm   504 PMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPPPPSFM 568

  Fly   859 --------ASPSKTTISPAPLPDPAEGNWFHRTNTMRKSAVNPPKPMRPLY--WTRIVTSAPPAP 913
                    .||..:|   :|:..|.          :.||||...|..:..:  |.::......|.
 Worm   569 FNGKVPNAFSPGTST---SPVLSPG----------VVKSAVVYRKQKKTAFVRWPKLTMQMQDAG 620

  Fly   914 RPPSVANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTEIEETPLDNID----------- 967
            ...:.:...|..|:..:..:|                      ..||.|:..::           
 Worm   621 TVFNDSLCVDFNEDERTKMEE----------------------VFEEAPVKQLNRKIAGSVGRAF 663

  Fly   968 -----------EFTELFSRQAIAP--VSKPKELKVKRAKSIKVLDPERSRNVGIIWRSLHVPSSE 1019
                       ||..:.:|....|  :..||.|.::..  ||.|.|              :..::
 Worm   664 GKSLRATTSSSEFNPMSARSPTNPQVLVSPKALTIEIL--IKKLKP--------------MEFTQ 712

  Fly  1020 IEHAIYHIDTSVVSLEALQHMSNIQATEDELQ---RIKEAAGGDIPLDH-PEQFLLDISLISMAS 1080
            :...:...||..:.::.:..::|....:.||.   :::.|.     |.| .:||...|:......
 Worm   713 LIEKLDANDTEGIKVDLMTTLNNNFPDKVELDPFLKVEYAT-----LTHASDQFCWHIARNKHLR 772

  Fly  1081 ERISCIVFQAEFEESVTLLFRKLETVSQLSQ---QLIESEDLKLVFSIILTLGNYMNGGNRQRGQ 1142
            .||...:    .:|:||....|.::..:|.|   ||...|.::::....|..|||:|.|: ...:
 Worm   773 LRIELFI----SKENVTAEIGKFQSQIELLQTGCQLARGEIVQVLLRKCLQYGNYLNQGS-MFAE 832

  Fly  1143 ADGFNLDILGKLKDVKSKESHTT--LLHFIVRTYI---------AQRRKEGVHPLEIRLPIPEPA 1196
            |.||....|.:|..:|.|..||:  |:..|| .|.         .|.|...|.||.::       
 Worm   833 AAGFQFSYLIQLLQMKGKGQHTSVRLVDLIV-AYCDLATAEVEEVQSRMGSVRPLNLK------- 889

  Fly  1197 DVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAK--VLAASRPEIMEPFKSKMEEFVEGADKSMAK 1259
                    |.|:|..|:....:|..|..|::::  ::||     .|||.::..|.::.....::.
 Worm   890 --------DLEDVVGQVQRSIRKLEGQLRSSSEETLIAA-----YEPFVNQTNEKLQNVQNGLSD 941

  Fly  1260 LHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTNDFKDIWKKEITSLLNELM 1324
            |     :.|:..|:..           |.....|....||..........|..|:..|.  |.|.
 Worm   942 L-----KARETELQVY-----------LCAGNMTLQAIFETLEQSMKIVSDAVKQAATK--NRLT 988

  Fly  1325 KKSKQAQIESRRNVSTKVEKSGRISLKERMLMR 1357
            :.|....:.: .:||.:..:.|.:..::.|.::
 Worm   989 RASSLVTLPT-SSVSRRSLREGEVLSRQSMALK 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 92/472 (19%)
inft-2NP_506253.4 FH2 597..975 CDD:388631 86/462 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
43.770

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