DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment capu and exc-6

DIOPT Version :9

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_497334.2 Gene:exc-6 / 175277 WormBaseID:WBGene00019030 Length:843 Species:Caenorhabditis elegans


Alignment Length:627 Identity:137/627 - (21%)
Similarity:243/627 - (38%) Gaps:156/627 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   741 VKSFTDAETQTESEDCEGTCKCGQSSTKVSDNESAKEDGEKPHAVAPPPPPPPPPLHAFVAPPPP 805
            :.|.||||.|.:                   ....|:..:......||||||||||.:.:...||
 Worm    40 ISSQTDAERQLQ-------------------KLQLKDPNDNIVKATPPPPPPPPPLISILQQAPP 85

  Fly   806 PPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPPPPPMSASPSKTTISPAP 870
            ||||||||                  :..||||||...::              :|||:..:|.|
 Worm    86 PPPPPPPP------------------TLKAPPPPPILGLK--------------TPSKSLKTPTP 118

  Fly   871 LPDPAEGNWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSVANSTDSTENSGSSPDEP 935
            .|.....::..:.....|:        |.:.|::|                     |:....|: 
 Worm   119 RPKECPTSFLPKKEKKTKT--------RTVQWSKI---------------------NASVVQDD- 153

  Fly   936 PAANGADAPPTAPPATKEIWTEIE-----ETPLDNIDEFTELFSRQAIAPVSKPKELKVKRAKS- 994
                             .:|.::.     :...|.:|.|   |..:::| ||...|:..|..:. 
 Worm   154 -----------------SVWGKLAKASNVDIDFDLLDNF---FGIESLA-VSGAAEVVKKSTRKD 197

  Fly   995 --IKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTS--VVSLEALQHMSNIQATEDELQRIKE 1055
              :::|..:||:||.|:.:..    ..|:..|..:..:  |..::|||::..:....:|.:.::.
 Worm   198 AHVELLTAKRSQNVAIMLKQF----KNIDELIDDVSQNKPVAEIDALQNLFGMLPQSEEEEALRR 258

  Fly  1056 AAGGDIPLDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRKLETVSQLSQQLIESEDLK 1120
            ..|....|..|..|...:..|.....||...:|.::|...:..|...:|.:.:.||:::.|..|.
 Worm   259 YTGDISLLSPPSSFFYRLVQIQFYRLRIETQIFLSDFSRLMRELAPNVEILIRTSQEILTSPTLP 323

  Fly  1121 LVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKESHTTLLHFIVR---TYIAQRRKEG 1182
            .:..|.:.:|||:||.|.| |.|.||.|:.|.||.|:|..:...:|||.:|.   ..:|..::  
 Worm   324 RLLLIFVNMGNYLNGNNSQ-GNAFGFTLNSLWKLIDLKGNKQEFSLLHLLVTCEPDLVAHLQE-- 385

  Fly  1183 VHPLEIRLPIPEPADVERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVLAASRPEIME----PFK 1243
                       |.:.::.|:|:.|:|::..:..|.......::.......||..:.:|    ..|
 Worm   386 -----------ELSTLKDASQISFDEIKISLKTLRDGRCKLEKQLETCSGASFTQFLELIKIDCK 439

  Fly  1244 SKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQFFEYWTNFTNDF 1308
            .:::||....||.....:|..|             :|.....|..|.:|.  :.|.:   ..|..
 Worm   440 FELDEFGANYDKLTELQYQLAD-------------YFCENRNTFQLDECL--KIFNF---LMNRL 486

  Fly  1309 KDIWKKEITSLLNELMKKSKQAQIESRRNVSTKVEKSGRISL 1350
            :...|:.:|....:| ||.::.:.::.|.....::|..:|.|
 Worm   487 QQTLKEHVTRETRKL-KKEEKKETQTTRECEKTMKKPEKIDL 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 90/443 (20%)
exc-6NP_497334.2 FH2 140..487 CDD:280362 87/425 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1922
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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