DRSC/TRiP Functional Genomics Resources

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Protein Alignment capu and Grid2ip

DIOPT Version :10

Sequence 1:NP_001137784.1 Gene:capu / 33611 FlyBaseID:FBgn0000256 Length:1361 Species:Drosophila melanogaster
Sequence 2:NP_001152793.1 Gene:Grid2ip / 170935 MGIID:2176213 Length:1203 Species:Mus musculus


Alignment Length:1313 Identity:262/1313 - (19%)
Similarity:434/1313 - (33%) Gaps:424/1313 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 HYPYDRRSLCTSCSSNDSLFTDPVDELIISKHYLNTAAKEHNNPKAKRDRPLSEISVTSVDTLSP 234
            |....|::...||..:|.|     .:.:.:|..:.||.|:.     ..::.:.|: |.::..:.|
Mouse   119 HRERRRKAQEFSCQVDDIL-----GDRLTAKEQVFTALKQF-----AAEQRVDEL-VWTLTLVLP 172

  Fly   235 NTAKA-VLE----------------------LQKRCRADKLACLSLTRVTYLSIANDLQEVEEPD 276
            :.|:. ||:                      |.|.|||.:.......|.:        :..|.|:
Mouse   173 SEAQGPVLDNLRIFIPKKHRARFDEVVSQGLLGKLCRARRAQGAQRLRRS--------RSEERPE 229

  Fly   277 RASILHDTDLLVAPNSPAESSPDEELMALQLGKKLAQVLG--SGAGSP----------------- 322
            |  :|..|....||..|.|..|          :|...:||  :|.|.|                 
Mouse   230 R--LLVSTRASAAPRRPDEPPP----------RKATSLLGGRTGPGGPRRTVRVYKGNKSFGFTL 282

  Fly   323 ----------LTPGT-MEPCAAGSGSPL--ANG-ELFNVSKAKKVELQNLSSRFTAAVTQTPPGV 373
                      :.||: .|..:..||..:  .|| ::.|.|..|.|.:...|......|.:     
Mouse   283 RGHGPVWIESVLPGSPAENASLKSGDRILFLNGLDMRNCSHDKVVSMLQGSGAMPTLVVE----- 342

  Fly   374 TSSTPNESGVTGPAGPLGATTSSPSLE--TQSTVIISFK------SSQTPVQSQTNSAASENVED 430
                         .||:...:.|.||:  |:::.:.|.:      .|...||.:|.|...:::  
Mouse   343 -------------EGPVPFASDSDSLDSPTRASALTSLQWVADILPSSIRVQGRTFSQQLDHL-- 392

  Fly   431 DTAPLPLPPPP-------------------------PGFGTPTTPLL------------SSNVLK 458
                  |.||.                         |...||...:|            .....:
Mouse   393 ------LTPPERYGVCRALERFFQHRNIDTLIVDVYPVLDTPAKQVLWQFLYQLLTYEEQELCQE 451

  Fly   459 KVASF------TVEKSSAGNNSSNPPNLCPTSDETTLL--ATPCSSSLTVATLP----------P 505
            |:|.|      |..:||......:.|...|.....:.|  ::.|..||....|.          |
Mouse   452 KIACFLGYTAMTEPESSLDLEPESTPEPTPEPQPRSSLRASSMCRRSLRSQGLETSLSCGPGDCP 516

  Fly   506 EIAVGAAAGGVAGGAGSRRGSSYVPEKLSFAAYEKFEGQMLIKWLISTMQSNPKSSSGDANQELF 570
            |:.:....|....|.|:....:..|:.:| |.|.:.|.::                         
Mouse   517 EMPLPLIPGERQAGDGTSLPETPNPKMMS-AVYAELESRL------------------------- 555

  Fly   571 NTLALQFCNNLKYVGVLKQISNEHLDCGFSPYEMYQWTHTEQPTTSLPLT--PGKLDKVAAWPFS 633
                     |..:.|.:..:|....    ||           |..||..|  |..|..| :||..
Mouse   556 ---------NSSFKGKIGTMSKSRA----SP-----------PVPSLVGTSGPRTLSGV-SWPSD 595

  Fly   634 STPSGIRALESASLASLGAGGVAGSLATIATASTASSDNQKTLQQILKKRLLNCTTLAEVHAVVN 698
                  |.|.|.....|.:||:         ||.:||::.........:.......|..:||   
Mouse   596 ------RLLPSPCYDPLCSGGL---------ASPSSSESHPYASLDSSRAPSPQPGLGSIHA--- 642

  Fly   699 ELLSSVDEPP-----RRPSKRCV-----------------NLTELLNASEATV-------YEYNK 734
                  |.||     |.||:|.:                 .|:|.|....:.|       .:|.:
Mouse   643 ------DSPPSPDPIRPPSRRKLFAFSRPVRSRDTDRFLDALSEQLGPRLSIVDDFLTPENDYEE 701

  Fly   735 TGAEGCVKSFTDAETQTESEDCEGTCKCGQSST--KVSDNESAKEDGEKPHAVAPPP--PPPPPP 795
            ........||...|..:.|| |..:.:.|.|.|  .:||:            :.|||  ||||||
Mouse   702 MSFHDDQGSFVTNERSSASE-CVSSSEEGSSLTYSSISDH------------IPPPPLSPPPPPP 753

  Fly   796 LHAFVAPPP-------PPPPPPPPPPPLANYGAPPPPPPPPPGSGSAPPPPPPAPIEGGGGIPPP 853
            | .|..|.|       |..||.....||.....|.|||||||    .|||.|.||          
Mouse   754 L-PFHDPKPSSRTSDGPRGPPQSLTKPLTQINHPVPPPPPPP----LPPPVPCAP---------- 803

  Fly   854 PPPMSASPSKTTISPAPLPDPAEGNWFHRTNTMRKSAVNPPKPMRPLYWTRIVTSAPPAPRPPSV 918
                              |..:.|....|:.|...|       ::.|.|.::             
Mouse   804 ------------------PMLSRGVGHRRSETSHMS-------VKRLRWEQV------------- 830

  Fly   919 ANSTDSTENSGSSPDEPPAANGADAPPTAPPATKEIWTEI-EETPLDNIDEFTELF-------SR 975
                   |||..:                      ||.:: |::..|.:.:..:..       ::
Mouse   831 -------ENSEGT----------------------IWGQLGEDSDYDKLSDMVKYLDLELHFGTQ 866

  Fly   976 QAIAPVSKPKELKVKRAKSIKVLDPERSRNVGIIWRSLHVPSSEIEHAIYHIDTSVVSLEALQHM 1040
            :...||..|:..:.|..  :::|..:::.|..|:...|.:...|:...:..::...:....|..:
Mouse   867 KPPKPVPGPEPFRKKEV--VEILSHKKAYNTSILLAHLKLTPGELRQVLMSMEPRRLEPAHLAQL 929

  Fly  1041 SNIQATEDELQR---IKEAAGGDIPLDHPEQFLLDISLISMASERISCIVFQAEFEESVTLLFRK 1102
            .......||.||   .:||.|   .|..|:||:|.:..:.....|:..:.|||..:|....:...
Mouse   930 LLFAPDADEEQRYQAFREAPG---RLSEPDQFVLQMLSVPEYKTRLRSLHFQATLQEKTEEIRGS 991

  Fly  1103 LETVSQLSQQLIESEDLKLVFSIILTLGNYMNGGNRQRGQADGFNLDILGKLKDVKSKESHTTLL 1167
            ||.:.|.|.:|..|..|..:...:|.:|||:|.|..:..:..||.::.|.:|...|:.:..:|.|
Mouse   992 LECLRQASLELKNSRKLAKILEFVLAMGNYLNDGQPKTNKTTGFKINFLTELNSTKTVDGKSTFL 1056

  Fly  1168 HFIVRTYIAQRRKEGVHPLEIRLPIPEPADV-ERAAQMDFEEVQQQIFDLNKKFLGCKRTTAKVL 1231
            |.:.:: ::|...|.:...:....:|..|.| :||...|..::...:.::.   :.|:       
Mouse  1057 HILAKS-LSQHFPELLGFAQDLPTVPLAAKVNQRALTGDLADLHDTVSEIQ---VACQ------- 1110

  Fly  1232 AASRPEIMEPFKSKMEEFVEGADKSMAKLHQSLDECRDLFLETMRFYHFSPKACTLTLAQCTPDQ 1296
             :..|...:.|...|..|:|.|..::..|.....|..:...:.:.|:....||       .|.:.
Mouse  1111 -SMAPSSEDRFAVVMASFLETAQPALRALDGLQREAMEELGKALAFFGEDSKA-------TTSEA 1167

  Fly  1297 FFEYWTNFTNDFK 1309
            ||..::.|.:.|:
Mouse  1168 FFGIFSEFMSKFE 1180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
capuNP_001137784.1 FH2 888..1315 CDD:214697 83/434 (19%)
Grid2ipNP_001152793.1 PDZ1_L-delphilin-like 2..77 CDD:467225
HN_L-delphilin-R1_like 122..201 CDD:259820 15/89 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 215..270 17/74 (23%)
PDZ2_L-delphilin-like 269..342 CDD:467226 13/72 (18%)
HN_L-delphilin-R2_like 378..457 CDD:259821 13/86 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 466..541 14/74 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 563..586 8/37 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 611..656 12/62 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 710..821 47/156 (30%)
FH2 812..1180 CDD:396655 84/440 (19%)
Blue background indicates that the domain is not in the aligned region.

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