DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and lrriq3

DIOPT Version :10

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_001340019.5 Gene:lrriq3 / 799689 ZFINID:ZDB-GENE-081104-400 Length:545 Species:Danio rerio


Alignment Length:661 Identity:127/661 - (19%)
Similarity:229/661 - (34%) Gaps:229/661 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    65 LRMYGVCRLHCLRELNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNS 129
            |..|.|..::|.:.|.|. :|....||.|:...:.::.|....:|:::.:.:...|....||||.
Zfish     4 LEAYQVYLVNCTQSLLLD-HGYWISEGDKDLTDIVMVRLNSLLVKSLDQIGSCKTLRICILADNF 67

  Fly   130 IGSISDMSYLRNLKELYLHGNRL---------THLRQCDKCLPTSLETLTLAKNSINDLNEICTL 185
            :..|..:....:|.::.|.||::         :||::        |:.|.|..|:::..:.|..|
Zfish    68 LTRIEPLMECTSLVKIDLKGNQIVQLPDASGWSHLKE--------LQLLYLHDNNMSTWDNIKGL 124

  Fly   186 SHLSNLLSISIADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFVV---DPIESL------KAE 241
            |....|.::::.|.|.     ||.| :||..::|...|||.:|.||:   :.||::      ||:
Zfish   125 SGCLKLTALTLYDTPV-----SLKG-NYRHRLVNNIWSLKALDNFVISDEEIIENMCLPFRFKAK 183

  Fly   242 ------WLYSQGRGRQFRVGEQQGLAKYLSSV----------------------------C---- 268
                  .||...:...|.. |.:.:.|.::.:                            |    
Zfish   184 KQHFCVRLYPPTKSDSFET-EMKVMYKIITEINRIQAFYSPTLIIQRWIRGYLIRRSLGLCGMKK 247

  Fly   269 ------PLVGKALENENDRKLRLILSKAQHHQRQLQEEIMDNANSSASTSPSSHRKKPTSRIQSP 327
                  |.:....|...:.::          ..||||.:.::.|.    .|...::|..::|:  
Zfish   248 PKASGKPFISNPTEKTENEQI----------PSQLQEAMEEDTND----HPEPGKQKRDTQIK-- 296

  Fly   328 RFSRLSGRQGSPESMVNSYHGNSSNNSIVSDNGSTNHSLQMSIS--LIENIK-NDGEGFSLAGSG 389
               ||         .||                 .|..:|.:..  |.||.| .||:      ..
Zfish   297 ---RL---------YVN-----------------LNKLMQTAYPEVLQENAKLYDGQ------QD 326

  Fly   390 MSSSVTTKTYNSTESTPRNITPNPYNDQTFISQTPSG-----GPLAAASKMVPVPETLMSPDVCP 449
            |.:...|.......|...| .||.......|.:|..|     |..|:..:..|:.:.|:|     
Zfish   327 MKALCNTPQCRLKLSVKTN-RPNQDIKDACIEETGEGNIHVLGLKASVHQSEPLSDLLLS----- 385

  Fly   450 AAVAQRVTVTALNPQLHKTKINKNKDNKLNLPRVRSPQ-------LKRNQSPTS-SPRRMANKCS 506
                             :..:|:..|     |:.|||.       :.|.|...| :|.::..|..
Zfish   386 -----------------RKALNQKPD-----PQPRSPAKTSRTHLISRRQDTVSFTPFKIIEKAH 428

  Fly   507 ADNMQAPEKLQQSAVLADSGGFSTDD----DGEQIN-IEKLRAIRKMAAQKQQQMHQEQLKQQVD 566
                |..:|.:....||:.......|    .|.::| ||..|.        :.::.||:.::..:
Zfish   429 ----QVFDKAKMQRELAEKVTERHVDREVAKGRRVNFIEDRRT--------EMRLRQEREREDTE 481

  Fly   567 NNLNCQDRLIEHVTESSAVTIQKMWRGYHTRKKTNKDIAERLQRRRTQEYIEQLGKDMLLTKAQL 631
            ..|..|                        |.|..:||.:  .|::..:::|             
Zfish   482 KTLTLQ------------------------RAKLEQDIHQ--ARQKHCQFME------------- 507

  Fly   632 ENERKIQQLQM 642
            :.:|:||:.:|
Zfish   508 DKKRRIQEQEM 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380
PPP1R42 13..229 CDD:455733 43/172 (25%)
leucine-rich repeat 32..53 CDD:275380
leucine-rich repeat 76..97 CDD:275380 6/20 (30%)
leucine-rich repeat 98..119 CDD:275380 2/20 (10%)
leucine-rich repeat 120..141 CDD:275380 6/20 (30%)
leucine-rich repeat 142..165 CDD:275380 6/31 (19%)
leucine-rich repeat 166..190 CDD:275380 7/23 (30%)
IQ 581..599 CDD:197470 1/17 (6%)
lrriq3XP_001340019.5 LRR <31..>141 CDD:443914 25/122 (20%)
leucine-rich repeat 58..79 CDD:275378 6/20 (30%)
leucine-rich repeat 80..104 CDD:275378 6/23 (26%)
leucine-rich repeat 105..117 CDD:275378 4/11 (36%)
G_path_suppress 432..>517 CDD:464961 22/131 (17%)
Blue background indicates that the domain is not in the aligned region.

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