DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cep97 and drc3

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_021327254.1 Gene:drc3 / 777619 ZFINID:ZDB-GENE-061103-349 Length:514 Species:Danio rerio


Alignment Length:270 Identity:72/270 - (26%)
Similarity:117/270 - (43%) Gaps:66/270 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGDESGEEKHVLNLSKQKLKKVPKQDDA--------HSIRQLILDENELQKIDNIDSYLKIETL 57
            |||.:  ||..|::  :|.|::..::...        ..:.:|.||...:.||.::.|:..:..|
Zfish     2 MSGQQ--EEPGVID--EQMLQRAVEEQQTRYTEGIQLEEVLELRLDYRNILKIYHLWSFSSLTKL 62

  Fly    58 SLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLEC 122
            .|..|.:.|:.|:..|..|..|:||||.|..||||:..:.|:.|:|..|.|..||:|:|...|:.
Zfish    63 QLDNNAIERIEGLENLTNLTWLDLSFNKIEVIEGLQTLVKLQDLSLFNNRISVIENLDTLQRLQV 127

  Fly   123 LNLADNSIGSISDMSYLRNLKELYLHGNRLTHLRQCDKCLPTSLETLTLAKNSINDLNEICTLSH 187
            |:|.:|||..:.::.|||..:                     ||.||.||.|.|.:.:.      
Zfish   128 LSLGNNSIAQLENVIYLRRFQ---------------------SLRTLNLAGNPICEEDR------ 165

  Fly   188 LSNLLSISIADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFVVD--PIESLKAEWLYSQGRGR 250
                                     |:.||..:...|.|:|..::|  ..|:..|::.|:....|
Zfish   166 -------------------------YKTFVSAYLPELVYLDYRLLDEQTRETANAKYQYAIEEMR 205

  Fly   251 QFRVGEQQGL 260
            |..:.|||.:
Zfish   206 QNEMQEQQAM 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 3/27 (11%)
leucine-rich repeat 32..53 CDD:275380 6/20 (30%)
LRR_RI <49..189 CDD:238064 44/139 (32%)
LRR_4 76..115 CDD:289563 18/38 (47%)
leucine-rich repeat 76..97 CDD:275380 11/20 (55%)
LRR_8 97..152 CDD:290566 18/54 (33%)
LRR_4 97..137 CDD:289563 15/39 (38%)
leucine-rich repeat 98..119 CDD:275380 9/20 (45%)
leucine-rich repeat 120..141 CDD:275380 8/20 (40%)
LRR_8 140..200 CDD:290566 9/59 (15%)
leucine-rich repeat 142..165 CDD:275380 0/22 (0%)
leucine-rich repeat 166..190 CDD:275380 7/23 (30%)
IQ 581..599 CDD:197470
drc3XP_021327254.1 leucine-rich repeat 39..58 CDD:275380 6/18 (33%)
leucine-rich repeat 59..80 CDD:275378 6/20 (30%)
LRR_9 61..198 CDD:317038 52/188 (28%)
leucine-rich repeat 81..102 CDD:275378 11/20 (55%)
leucine-rich repeat 103..124 CDD:275378 9/20 (45%)
leucine-rich repeat 125..149 CDD:275378 9/44 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.