DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and Lrrcc1

DIOPT Version :10

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001157051.1 Gene:Lrrcc1 / 71710 MGIID:1918960 Length:1026 Species:Mus musculus


Alignment Length:929 Identity:196/929 - (21%)
Similarity:338/929 - (36%) Gaps:277/929 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 HVLNLSKQKLKKVPKQDDAHSIRQLILDENELQKIDNIDSYLKIETLSLARNQLLRMYGVCRLHC 75
            |.:||....:.|:...|...::|.|.|..|::.:|:.:::..|:.||:|:.|.:.|:.|:..|..
Mouse    41 HAINLHCNNISKISSIDHIWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCNLITRVEGLEALVN 105

  Fly    76 LRELNLSFN------GILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLEC---LNLADNSI- 130
            |.:||||:|      |::.:.|||  ..||.::|..|.|.:|.||     |:|   |:...|.| 
Mouse   106 LTKLNLSYNHINDLSGLMPLHGLK--YKLRYIDLHSNYIDSIHHL-----LQCTVGLHFLTNLIL 163

  Fly   131 ---GSISDMSYLRNLKELYLHGNRLTHLRQCDKCL-----PTSLETLTLAKNSINDLNEICTLSH 187
               |..:.:..:...:.:.|  ..|..||..| |.     |.|||       .||..:..|....
Mouse   164 EKDGEGNPICLIPGYRAIIL--QTLPQLRILD-CKNIFGEPVSLE-------EINSSHLQCLEGL 218

  Fly   188 LSNLLSISIADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFV----VDPIESLKAEWLYSQGR 248
            |.||:|   :|:|                 ||  :|...::..|    :|.:.|||         
Mouse   219 LDNLVS---SDSP-----------------LN--ISEDEVNDDVSAPPMDVLPSLK--------- 252

  Fly   249 GRQFRVGEQQGLAKYLSSVCP-LVGKALENENDRKLRLILSKAQHHQRQLQEE----IMDNA--- 305
              :|:...:..:...|.|||| ...:.:..|||.:..:.|.|......||..|    ::||.   
Mouse   253 --EFKSTPEDNVLASLLSVCPSSEPEKINQENDFQNEVKLQKLDDQILQLLNETNNSLIDNVPEK 315

  Fly   306 -----NSSASTSPSSH-------RKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSD 358
                 ..:..||.|.:       ||.| .|.:.|.:||         ::....|.|.:|.:.||.
Mouse   316 DLRPKRDTDITSESDYGNRRECSRKVP-RRTKIPYYSR---------TIQTIKHHNKNNGAFVSC 370

  Fly   359 NGSTN----HSLQMSISLI--ENIKNDGE---GFSLAGSGMSSSVTTKTYNS------------- 401
            |....    ..|.:..||:  .|:::..|   |........|.:   .||.|             
Mouse   371 NRKMRQPYLRDLYVRSSLVNCNNLRDLDEQKTGVIKVDKNFSDN---STYRSLVEQLDQEREMRW 432

  Fly   402 -TESTPRNITPNPYNDQTFISQTPSGGPLAAASKMVPVPETLMSPDVCPAAV-AQRVTVTALNPQ 464
             .|.|.:.:.  .|.|:..         ..|..|.....:.|::.|....|: .:|.....|...
Mouse   433 KAEQTEKKLM--DYIDELH---------KQADEKKDVHSQALITTDRLKDAIFKERHCKAQLEII 486

  Fly   465 LHKTKINKNKDNKLNLPRVRSPQLKRNQSPTSSPRRMANKCSADNMQAPEKLQQSAVLADSGGFS 529
            :|:.: |:.|...:.|.:.|..|                   .|:::....|:            
Mouse   487 VHRLQ-NEVKKLTIELMKARDQQ-------------------EDHIRHLRTLE------------ 519

  Fly   530 TDDDGEQINIEKLRAIRKMAAQK-QQQMHQEQLKQQVDNNLNCQDRLIEHVTESSAVTIQKMWRG 593
                         ||:.||..|| |||..|.:|.|:|:...:..||.|..:..|           
Mouse   520 -------------RALEKMEKQKAQQQAAQIRLIQEVELKASAADREINLLRTS----------- 560

  Fly   594 YHTRKKTNKDIAERL--------QRRRTQEYIEQLGKDMLLTKAQLENERKIQQ---LQMQAINA 647
            .|..|:..:.:.|.|        |...|:::.........|||...:.|||.:|   ...:.|:.
Mouse   561 LHQEKQQVQQLHELLALKEQEHRQEIETRQFFTDAEFQDALTKRLCKEERKHEQEVKEYQEKIDI 625

  Fly   648 LWKKVSTMEVDPK-GIPAAAEQGEDSNGG---------GSGHLSL-----DQNSAAVVNDLA--- 694
            |.::...:|.:.: .:...|.:.:|...|         .|.|..:     :..|::::.||.   
Mouse   626 LNQQYLDLENEFRIALTVEARRFKDVQDGFEDVATELAKSKHALIWAQRKENESSSLIKDLTCMV 690

  Fly   695 -KRCTMLTDQVQMLQSSIGTIVNCLTMVCNLPQDAIKK--QAEIIDCSSTQ--TDLIAVHT---- 750
             ::.|.|::..::.|.:...:.|.:..:..|.:|..:|  |.|::....||  ::|.|..:    
Mouse   691 KEQKTKLSEVCKLKQEAAANLQNQINTLEILIEDDKQKSIQIELLKHEKTQLISELAAKESLIYG 755

  Fly   751 ---------------------------PQIEDLTNFPFTKTRPSTLALESKHEA-----ALACPK 783
                                       .|||.|..        ...:|...||:     .:.|..
Mouse   756 LRTERKVWGQELACQSSTLSQSRGKLEAQIESLCR--------ENESLRKSHESDCDALRIKCKI 812

  Fly   784 IDELNDV--DLKETQEDSE 800
            |::.|:.  .||::.::.:
Mouse   813 IEDQNETIRKLKDSLQEKD 831

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 5/19 (26%)
PPP1R42 13..229 CDD:455733 63/233 (27%)
leucine-rich repeat 32..53 CDD:275380 5/20 (25%)
leucine-rich repeat 76..97 CDD:275380 10/26 (38%)
leucine-rich repeat 98..119 CDD:275380 8/20 (40%)
leucine-rich repeat 120..141 CDD:275380 6/27 (22%)
leucine-rich repeat 142..165 CDD:275380 7/27 (26%)
leucine-rich repeat 166..190 CDD:275380 6/23 (26%)
IQ 581..599 CDD:197470 2/17 (12%)
Lrrcc1NP_001157051.1 PPP1R42 25..197 CDD:455733 48/165 (29%)
LRR 1 39..60 5/18 (28%)
leucine-rich repeat 43..61 CDD:275378 4/17 (24%)
LRR 2 61..82 5/20 (25%)
leucine-rich repeat 62..83 CDD:275378 5/20 (25%)
LRR 3 83..104 7/20 (35%)
leucine-rich repeat 84..105 CDD:275378 7/20 (35%)
LRR 4 105..126 7/20 (35%)
leucine-rich repeat 106..131 CDD:275378 10/26 (38%)
LRR 5 131..152 9/25 (36%)
leucine-rich repeat 132..145 CDD:275378 5/12 (42%)
leucine-rich repeat 158..188 CDD:275380 5/31 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..338 5/27 (19%)
SMC_N 467..>766 CDD:481474 66/354 (19%)
SMC_prok_B <646..1026 CDD:274008 32/194 (16%)

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