DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and lrrc23

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001006054.1 Gene:lrrc23 / 450033 ZFINID:ZDB-GENE-041010-153 Length:326 Species:Danio rerio


Alignment Length:212 Identity:64/212 - (30%)
Similarity:101/212 - (47%) Gaps:20/212 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 DENELQKIDN--IDSYLKIETLSLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGL--KECIHL 98
            |.|.||..:.  ......::.||:|.|:|..:.|:.. ..|..|||:.|||.:::||  ....:|
Zfish   112 DSNLLQGFEGQPFGQLTFLQWLSIASNRLFDVTGLGG-PALETLNLTGNGIQTMQGLDHPNLTNL 175

  Fly    99 RVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSISDMSYLRNLKELYLHGNRLTHLRQCD---K 160
            ..|.|.||.::|.:.:.. .||..|.||.|:|..:..:..|..|..|:|..|:|..|....   |
Zfish   176 VTLELRGNCLETTDGIYL-PNLRHLYLAQNNIKKLEGLEKLERLITLHLRHNQLETLDGLSASMK 239

  Fly   161 CLPTSLETLTLAKNSINDLNEICTLSHLSNLL-SISIADNPCVTMINSLDGFDYRPFVLNWCMSL 224
            |    ||.|.:..|.|:.:..:.||:.:...| ::.:.|||    |...|  |||.:|::....|
Zfish   240 C----LEYLNVRGNLISSMRALQTLASVGQTLKALVLLDNP----IAKTD--DYRLYVISQLPHL 294

  Fly   225 KYIDGFVVDPIESLKAE 241
            :.:|...|.|.|..:|:
Zfish   295 ERVDKDPVTPEEKFEAQ 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380
leucine-rich repeat 32..53 CDD:275380 4/16 (25%)
LRR_RI <49..189 CDD:238064 44/144 (31%)
LRR_4 76..115 CDD:289563 15/40 (38%)
leucine-rich repeat 76..97 CDD:275380 9/22 (41%)
LRR_8 97..152 CDD:290566 18/54 (33%)
LRR_4 97..137 CDD:289563 13/39 (33%)
leucine-rich repeat 98..119 CDD:275380 6/20 (30%)
leucine-rich repeat 120..141 CDD:275380 7/20 (35%)
LRR_8 140..200 CDD:290566 17/63 (27%)
leucine-rich repeat 142..165 CDD:275380 8/25 (32%)
leucine-rich repeat 166..190 CDD:275380 7/23 (30%)
IQ 581..599 CDD:197470
lrrc23NP_001006054.1 leucine-rich repeat 64..83 CDD:275380
LRR_4 65..102 CDD:289563
LRR_8 83..140 CDD:290566 8/27 (30%)
leucine-rich repeat 84..105 CDD:275380
leucine-rich repeat 106..129 CDD:275380 4/16 (25%)
leucine-rich repeat 130..150 CDD:275380 6/20 (30%)
LRR_8 149..206 CDD:290566 21/57 (37%)
leucine-rich repeat 151..174 CDD:275380 9/22 (41%)
leucine-rich repeat 175..195 CDD:275380 6/20 (30%)
LRR_8 194..251 CDD:290566 20/60 (33%)
LRR_4 194..235 CDD:289563 14/40 (35%)
leucine-rich repeat 196..217 CDD:275380 7/20 (35%)
LRR_4 216..258 CDD:289563 13/45 (29%)
leucine-rich repeat 218..240 CDD:275380 6/21 (29%)
leucine-rich repeat 241..262 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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