DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and cfap410

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_017952557.1 Gene:cfap410 / 394810 XenbaseID:XB-GENE-970167 Length:256 Species:Xenopus tropicalis


Alignment Length:248 Identity:60/248 - (24%)
Similarity:104/248 - (41%) Gaps:42/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSISDMSYLRNLK 143
            :.|:...:||.....:..::|.||..|:.:..|...:...|:|.:.|:.|:|.::..:.|..||.
 Frog     1 MKLTHKQVLSRAKASDLENVRKLNCWGSRLTDISVCHELPNIEVMTLSVNNISTLEPIRYCHNLA 65

  Fly   144 ELYLHGNRLTHLRQCDKCLPTSLETLTLAKNSINDLNEICTLSHLSNLLSISIADNPCVTMINSL 208
            ||||.                        ||:|:.|||:..|..|..|..:.:::|||.    ..
 Frog    66 ELYLR------------------------KNNISSLNELYYLKELPRLKILWLSENPCC----GA 102

  Fly   209 DGFDYRPFVLNWCMSLKYIDGFVVDPIESLKAEWLYSQGRGRQFRVGEQQGLAKYLSSVCPLVGK 273
            |...||..||....:|:.:|..||...|..:|.....:..|.|.::..... :...:|:....| 
 Frog   103 DPQKYRMTVLRNLPNLQKLDNQVVTEEELTQALTDGEELTGPQTKISNSDN-SHDETSIDRNYG- 165

  Fly   274 ALENENDRKLRLILSKAQHHQRQLQEEI------MDNANS-SASTSPSSHRKK 319
            ..|:|||     :|:.:.....:::|::      .|..:| |:.|.....|||
 Frog   166 TRESEND-----LLNFSMEETNKIREQLGMKPLPRDKFSSFSSPTDGDGSRKK 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380
leucine-rich repeat 32..53 CDD:275380
LRR_RI <49..189 CDD:238064 27/109 (25%)
LRR_4 76..115 CDD:289563 8/35 (23%)
leucine-rich repeat 76..97 CDD:275380 3/17 (18%)
LRR_8 97..152 CDD:290566 17/54 (31%)
LRR_4 97..137 CDD:289563 10/39 (26%)
leucine-rich repeat 98..119 CDD:275380 5/20 (25%)
leucine-rich repeat 120..141 CDD:275380 5/20 (25%)
LRR_8 140..200 CDD:290566 15/59 (25%)
leucine-rich repeat 142..165 CDD:275380 5/22 (23%)
leucine-rich repeat 166..190 CDD:275380 8/23 (35%)
IQ 581..599 CDD:197470
cfap410XP_017952557.1 internalin_A <4..>161 CDD:380193 45/185 (24%)
leucine-rich repeat 20..39 CDD:275378 5/18 (28%)
leucine-rich repeat 42..63 CDD:275382 5/20 (25%)
LRR_9 <63..134 CDD:373143 28/98 (29%)
leucine-rich repeat 64..87 CDD:275382 12/46 (26%)
leucine-rich repeat 89..117 CDD:275382 9/31 (29%)
SART-1 177..>210 CDD:367453 5/32 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R8601
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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