DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cep97 and CG13708

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001261433.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster


Alignment Length:858 Identity:174/858 - (20%)
Similarity:296/858 - (34%) Gaps:297/858 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 RQLI---LDENELQKIDNIDSYLKIETLSLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGLKE 94
            :||:   |.:|::::|.|:|....:..|.|.:|::..:.|                   :..||:
  Fly   470 QQLVFLDLYDNQIERIANLDGLPSLSVLLLGKNRITDIGG-------------------LSSLKD 515

  Fly    95 CIHLRVLNLEGNNIKTI-EHLNTNVNLECLNLADNSIGSISDMSY--LRNLKELYLHGNRLTHLR 156
            .  ||||:|.||.:.:: ..:|....|:.||||.|.|..|:...:  ||.|:||.|..|:|..:.
  Fly   516 T--LRVLDLHGNKLTSLGSRINCLQQLKSLNLAGNQIRQINQQDFLGLRCLRELNLKRNKLRRIN 578

  Fly   157 QCDKCLPTSLETLTLAKNSINDLNEICTLSHLSNLLSISIADNP------CVTMINSLDGFDYRP 215
            .....:  :||.|.|..|.::.::::.:::..:.||.::|.:||      ||:.:.|     |.|
  Fly   579 GFQHLV--ALERLWLCHNDLHRVDDMASIARATRLLEVTIENNPVSLAGDCVSFLVS-----YLP 636

  Fly   216 FV----------------LNWCM-----------SLKYIDGFVVDPIESLKAEW--LYSQ----G 247
            .:                |.|..           |..|.:....:.|.:.:..|  |.||    |
  Fly   637 LLQTLSQMPITEQVRRAALAWRQHKEQAQAAPGSSEAYHNIRREEVISNARTNWELLRSQQTVVG 701

  Fly   248 RGRQFRVGEQQGLAKYLSSVCPLVGKALENENDRKLRLILSKAQHHQRQLQEEIMDNANSSASTS 312
            |.:.....|   |||...|.....|:..|.|::             :.|..:|:||...:.....
  Fly   702 RPKSRLTSE---LAKINESNEGPAGEEGEMESE-------------ESQQPKELMDELQALIKLP 750

  Fly   313 P------SSHRKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSDNGSTNHSLQMSIS 371
            |      :.|.:...|       |..|....:.:|..:.|   ||:|   .|.|:.|......|.
  Fly   751 PIAKDLRNPHEEDGAS-------SEASSLGPNVDSCSSCY---SSDN---EDGGAKNKPQTPQID 802

  Fly   372 LIENIKNDGEGFSLAGSGMSSSVTTKTYNS-----TESTPRNITPN--------PYNDQTFISQT 423
              ||....|    |.....||.||..:.:.     |.|.|.:.:|:        |....|.:..|
  Fly   803 --ENSNKVG----LTEKPPSSPVTVASQSPEVAIVTPSAPVSSSPSPPALTLTPPAAPGTPVPGT 861

  Fly   424 PSGGPLAAASKMVPVPETLMSPDVCPAAVAQR---VTVTALNPQLHKTKINKNKDNKLNLPRVRS 485
            .|..|.......:|||.|..|....|.:..||   ..:|.|..|     ||:......:..|..:
  Fly   862 TSPSPSTTIISTLPVPATASSNASRPTSSKQRSRHAPITQLGLQ-----INQRGGAAASSKRYMA 921

  Fly   486 PQLKRNQSPTSSPRRMANKCSAD---------NMQAPE-------KLQQSA-VLADSGGFST--- 530
            ..|.|.|:.:||....::..||.         |:.|.:       ..|.|| ..|.:||.:|   
  Fly   922 GSLVRAQTVSSSTSNSSSSNSAGRGKATNNGLNLVATQTKAATSGNNQSSAGAAAGTGGSTTAAP 986

  Fly   531 --------------------------------DDDGEQINIEKLRAIRKMAAQ----KQQQMHQ- 558
                                            :..|..:||....|:|.:..|    |...:|. 
  Fly   987 PAGAAATPNAAITVSKPSAAEREREQGGDYLIEICGRYLNIYGQGALRFIDKQWNPAKANDVHTL 1051

  Fly   559 --------------EQLKQQV---------DNNLNCQDRL-------------IEHVTESSAVTI 587
                          .::|.:.         :.|::|..:|             |:  .|.:.:|:
  Fly  1052 NFSYINFNSIVCVLGRIKLRFPHAEHYVFRETNISCLGQLNGLAELQGLSSLMID--AEGNGITL 1114

  Fly   588 QKMWRGYHTRKKTNKDIAERLQRRRTQEYIEQLGKDMLLTKAQLENERKIQQLQMQAINA----- 647
            ::.||.|..             .|.:...::||            |.:::.:.:::|.||     
  Fly  1115 KETWRAYAI-------------YRLSHWGLKQL------------NGQEVTEAEVEAANAMYVGL 1154

  Fly   648 ----LWKKVSTM-----------------EVDPKG-------------IPAAAEQGEDSNGGGSG 678
                ||.....|                 ::.||.             :...|.|.:.:.|||:|
  Fly  1155 SDLVLWSMPEVMLQPLLARLRLDETCTASKLSPKEWLLRPDNKSLRLVVGKEALQWKKNAGGGAG 1219

  Fly   679 ---HLSLDQNSAA 688
               .::::|.:.|
  Fly  1220 TSTSMNINQGTEA 1232

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380
leucine-rich repeat 32..53 CDD:275380 7/22 (32%)
LRR_RI <49..189 CDD:238064 36/142 (25%)
LRR_4 76..115 CDD:289563 9/39 (23%)
leucine-rich repeat 76..97 CDD:275380 2/20 (10%)
LRR_8 97..152 CDD:290566 23/57 (40%)
LRR_4 97..137 CDD:289563 16/40 (40%)
leucine-rich repeat 98..119 CDD:275380 8/21 (38%)
leucine-rich repeat 120..141 CDD:275380 9/22 (41%)
LRR_8 140..200 CDD:290566 15/59 (25%)
leucine-rich repeat 142..165 CDD:275380 6/22 (27%)
leucine-rich repeat 166..190 CDD:275380 5/23 (22%)
IQ 581..599 CDD:197470 5/17 (29%)
CG13708NP_001261433.1 LRR_RI <428..572 CDD:238064 35/122 (29%)