DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and Lrrc43

DIOPT Version :10

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001028633.1 Gene:Lrrc43 / 381741 MGIID:2685907 Length:667 Species:Mus musculus


Alignment Length:539 Identity:122/539 - (22%)
Similarity:191/539 - (35%) Gaps:125/539 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LKKVPKQDDAHSIRQLILDENELQKIDNIDSYLKI-----ETLSLARNQLLRMYGVCRLHCLREL 79
            ||....:|  ..:|:|.:....:.|.....||.:.     :.:||....||:...      |.||
Mouse    96 LKDASAED--RFLRELAIQNPLMIKDTFFYSYFRSLRVVNKGVSLVDKDLLKFLK------LEEL 152

  Fly    80 NLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNT--NVNLECLNLADNSIGSISDMSYLRNL 142
            .||.|.|..|:.......|:||.|.||.|.::|.|.:  ...|:.|.|..|.:        |..|
Mouse   153 VLSANKIEEIDANNLPPTLKVLELYGNLIASMECLCSAPPPRLQHLGLGHNKL--------LGPL 209

  Fly   143 KELYLHGNRLTHLRQCDKCLPTSLETLTLAKNSINDL-NEICTLSHLSNLLSISIADNPCVTMIN 206
            :.||:..:..           ..|.:|.|..|::.|| |.|..||.|.:|..:.:..||.     
Mouse   210 ESLYVTSHNW-----------PQLVSLDLGFNNLTDLQNMILGLSTLRHLRLLVLQGNPL----- 258

  Fly   207 SLDGFDYRPFVLNWCMSLKYIDGFVVDPIESLKAEWLYSQG----RGRQF--RVGEQQGLAKYLS 265
            ||..: ||.|.::....|..:|...|.|.|..:...|...|    |..||  .:|..:|:..  |
Mouse   259 SLVPY-YRGFTIDSLAHLCVLDDITVSPNEKHQFRGLNIHGDLLAREAQFVVTIGNVRGVLD--S 320

  Fly   266 SVC--------PLVGKA-------LENENDRKLRLILSKAQHHQRQL---------------QEE 300
            |:.        |.:..:       :|:|:..:....|.:|.||...|               ||:
Mouse   321 SILDPEPGPDGPFISYSYYVTYDFVEDEDMERNVSGLVEATHHDSVLDEIDKHFSGTDEEDQQED 385

  Fly   301 IMDNANSSASTS---PSS--HRKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSDNG 360
            .:|..:......   |.|  ...|..|...:...|:::  :||.||.:.....:.::.||     
Mouse   386 PLDGRHRHRGRQRFHPGSTEEMSKELSEFIAKEMSQMA--EGSVESGITEVDWSETSISI----- 443

  Fly   361 STNHS--LQMSISLIENI-----KNDGEGFSLAGSGMSSSVTTKTYNSTESTPRNITPNPYN-DQ 417
               ||  |..||...|.:     |.|.:        :..|..|..:|:......::.|..|. ..
Mouse   444 ---HSAPLPQSIDSSEELAKLRPKIDIQ--------LCPSPGTVLFNTVHKPWSDVIPCTYEMKH 497

  Fly   418 TFISQTPSGGPLAAASKMVPVPETLMSPDVCPAAVAQRVTVTALNPQLHKTKINKNKDNKLNLPR 482
            |..........|.|.:.:..|.|.::|..|.|..|...:..            .|.|||......
Mouse   498 TLKELIRVKAFLLAGTTVSIVEEKILSWPVVPTPVESPLPA------------KKGKDNNKKKEP 550

  Fly   483 VRSPQLKRNQSPTSSPRRM 501
            .:....|:.:.|   ||.:
Mouse   551 AKDKVHKKKKEP---PREL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 3/10 (30%)
PPP1R42 13..229 CDD:455733 57/216 (26%)
leucine-rich repeat 32..53 CDD:275380 5/20 (25%)
leucine-rich repeat 76..97 CDD:275380 8/20 (40%)
leucine-rich repeat 98..119 CDD:275380 9/22 (41%)
leucine-rich repeat 120..141 CDD:275380 5/20 (25%)
leucine-rich repeat 142..165 CDD:275380 3/22 (14%)
leucine-rich repeat 166..190 CDD:275380 11/24 (46%)
IQ 581..599 CDD:197470
Lrrc43NP_001028633.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
LRR 1 148..169 8/26 (31%)
PPP1R42 154..291 CDD:455733 46/161 (29%)
LRR 2 170..191 9/20 (45%)
leucine-rich repeat 171..194 CDD:275378 9/22 (41%)
LRR 3 194..213 6/26 (23%)
leucine-rich repeat 195..221 CDD:275378 8/44 (18%)
LRR 4 221..242 8/20 (40%)
leucine-rich repeat 222..247 CDD:275378 11/24 (46%)
leucine-rich repeat 248..259 CDD:275378 3/15 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 374..407 5/32 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 533..570 8/49 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 616..640
Blue background indicates that the domain is not in the aligned region.

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