DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and Dnaaf1

DIOPT Version :10

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_063134214.1 Gene:Dnaaf1 / 361419 RGDID:1310542 Length:753 Species:Rattus norvegicus


Alignment Length:613 Identity:135/613 - (22%)
Similarity:220/613 - (35%) Gaps:163/613 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSKQKLKKVPKQDDAHSI-------RQLILDENELQKIDNIDSYLKIETLSLARNQLLRMYGVCR 72
            ::||.|:|:.||   |.:       ..|.|......:|:|::.|..                   
  Rat    89 MTKQFLQKLCKQ---HKLYVTPALNDTLYLHFKGFDRIENLEEYTG------------------- 131

  Fly    73 LHCLRELNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSISDMS 137
               ||.|.|..|||..||.|:....||.|.|:.|.:..||:|.....|:.|||::|.|.:|.::|
  Rat   132 ---LRCLWLECNGIQRIENLQAQSELRCLFLQVNLLHKIENLEPLQKLDALNLSNNYIKTIENLS 193

  Fly   138 YLRNLKELYLHGNRL------THLRQCDKCLPTSLETLTLAKNSINDLNEICTLSHLSNLLSISI 196
            .|..|..|.:..|||      .|||:|     ..|..|.|:.||::|...:..|..:..|..:::
  Rat   194 CLPVLNTLQMAHNRLETVADIEHLREC-----LQLCVLDLSHNSLSDPEILSVLETMPCLRVLNL 253

  Fly   197 ADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFVVDPIESLKAE-WLYSQGRG---------RQ 251
            ..||....|.     :||..|......|.|:|...|.|.:...|| |    .||         .|
  Rat   254 MGNPVTKHIP-----NYRRTVTVRLKHLTYLDDRPVFPKDRACAEAW----ARGGYAAEKEERHQ 309

  Fly   252 FRVGEQQGLAKYLSSVCPLVGKALENENDRKLRLILSKAQHHQRQLQEEIMDNANSSASTSPSSH 316
            :...|.:.:...|.::..:..:|.|.:          ||    |...|..:..:..|..|||.:.
  Rat   310 WESREHKKITDSLEALAMIKRRAEERK----------KA----RDRGETPLPESEKSIPTSPEAQ 360

  Fly   317 RKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSDN---------GSTNHSLQMSISL 372
            .|.|....|....|.:.....:.:.:.....|.....|:|..|         |:..|:....:..
  Rat   361 EKPPKGETQQKMESFVKESFEAKDELFPEKPGEGEELSVVVGNRAVEDADLSGNLAHTQTPVVVT 425

  Fly   373 IENIKN-----------DGEGFSLA-----------------GSGMS----------------SS 393
            .|.:.:           |.|..:|.                 |:.:|                ||
  Rat   426 PEEVTSPVEATDGARTEDTEAIALETKEKLFIDDLPDLEDVDGTDVSVEDQTKDTGIRKIQAISS 490

  Fly   394 VTTKTYNSTESTPRNI---TPNPYNDQTFISQTPSGGPLAAASKMVPVPETLMSPDVC-PAAV-- 452
            ::..:....|..|.::   ||        ||.|.:...:.|.||.......:...|:| |.|.  
  Rat   491 LSDDSDLELEELPLSVFEGTP--------ISPTGALSHIFAVSKDPSEAARVPFADICMPTATTD 547

  Fly   453 ----AQRVTVTALNP---QLHKTKINKNKDNKLNLPR--VRSPQLKR------NQSPTSSPR--- 499
                :|..:..:.:|   :|.:.::.:.:.|:...|:  ...|.|.:      :|.|.::|.   
  Rat   548 LETQSQDPSTASSHPLIQELGEDELTEGESNQPLPPQSCASDPTLAQSSEGGDSQLPAATPLGNA 612

  Fly   500 --RMANKCSADNMQAPEKLQQSAVLADS 525
              |:....:.|:.|....:|..||.|.|
  Rat   613 LWRLCRGWTTDHPQPHCCVQAQAVWAVS 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 6/15 (40%)
PPP1R42 13..229 CDD:455733 64/226 (28%)
leucine-rich repeat 32..53 CDD:275380 5/27 (19%)
leucine-rich repeat 76..97 CDD:275380 10/20 (50%)
leucine-rich repeat 98..119 CDD:275380 8/20 (40%)
leucine-rich repeat 120..141 CDD:275380 9/20 (45%)
leucine-rich repeat 142..165 CDD:275380 9/28 (32%)
leucine-rich repeat 166..190 CDD:275380 7/23 (30%)
IQ 581..599 CDD:197470
Dnaaf1XP_063134214.1 None
Blue background indicates that the domain is not in the aligned region.

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