DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and Dnaaf11

DIOPT Version :10

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_038934705.1 Gene:Dnaaf11 / 299920 RGDID:1559937 Length:486 Species:Rattus norvegicus


Alignment Length:547 Identity:124/547 - (22%)
Similarity:203/547 - (37%) Gaps:143/547 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 QKIDNIDSYLKIE---TLSLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGL-KECIHLRVLNL 103
            :.:.|:...|.:.   |..|.|..  ..:..|.:..|.||:|....|..:|.: |.|..|::|.|
  Rat     3 RSLPNVQGLLLVNVGVTEDLIRRN--AEHNECVIFSLEELSLHQQEIERLEHIDKWCRDLKILYL 65

  Fly   104 EGNNIKTIEHLNTNVNLECLNLADNSIGSISDMSYLRNLKELYLHGNRLTHLRQCDKCLPTSLET 168
            :.|.|..||:::....||.||||.|:|                   .|:.:|..|:     .|..
  Rat    66 QNNLIAKIENVSKLKKLEYLNLALNNI-------------------ERIENLEGCE-----WLTK 106

  Fly   169 LTLAKNSINDLNEICTLSHLSNLLSISIADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFVVD 233
            |.|..|.|.:|:.|.||:|..:|..:.:..|||.    ..||  ||.||:.....||::||..::
  Rat   107 LDLTVNFIGELSSIKTLTHNIHLRELFLVGNPCA----DFDG--YREFVVVTLQQLKWLDGKEIE 165

  Fly   234 PIESLKA--------------EWLYSQGRGRQFRVG------EQQGLAKYLSSV----------- 267
            ..|.::|              |..|...|.::....      |.:...|..||.           
  Rat   166 RSERIQALQNYAAVEQQIREQEKAYCLRRAKEKEEAQRKLEEENESEDKKKSSPGFDGDCYTDIH 230

  Fly   268 --CPLVGKALENENDRKLRLILSKAQHHQRQLQEEIMDNA---NSSASTSPSS------HRKKPT 321
              ||   .|:||::  .|::..::.|.|..:..:||.|:.   |..:..:|.|      |.:|  
  Rat   231 ADCP---SAMENKD--HLQVPETQEQQHSTKKSDEIEDDLAFWNKPSLFTPESRLETLRHMEK-- 288

  Fly   322 SRIQSPRFSRLSGRQGSPESMVN---------------SYHGNSSNNSIVSDNGSTNHSLQMSIS 371
            .|....:.|....|...|.:::.               |...:..:|.|:.|.....:   |..|
  Rat   289 QRKAQDKLSEKKKRVKPPRTLITEDGKVLNVNEAKLDFSLKDDEKHNQIILDLAVYRY---MDTS 350

  Fly   372 LIE--------NIKNDGEGFSLAGSGMSSSVTTKTYNSTESTPRNITPNPYNDQTFISQTPSGGP 428
            |||        .:...|:.|.||   :|:.|                 .|.:.....||| :|..
  Rat   351 LIEVDVQPTYVRVMVKGKPFQLA---LSAEV-----------------QPDSSSAKRSQT-TGHL 394

  Fly   429 LAAASK---MVPVPETLMSPDVCPAAVAQRVTVTALNPQLHKTKINKNKDNKLNLPRVRSPQLKR 490
            |....|   |:...:|.||  |..|:.:.:........|:.:.:::.:|.   :.|.|.:...:|
  Rat   395 LICMPKVGEMITGQQTPMS--VKTASESSKEQTKPRRKQVERLEVDPSKH---SCPDVSTIVQER 454

  Fly   491 NQSP---TSSPRRMANKCSADNMQAPE 514
            ...|   .|.|:...::...|....||
  Rat   455 KHKPKRMESQPQVEPSEAEPDFDDNPE 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380
PPP1R42 13..229 CDD:455733 54/189 (29%)
leucine-rich repeat 32..53 CDD:275380 1/9 (11%)
leucine-rich repeat 76..97 CDD:275380 8/21 (38%)
leucine-rich repeat 98..119 CDD:275380 7/20 (35%)
leucine-rich repeat 120..141 CDD:275380 8/20 (40%)
leucine-rich repeat 142..165 CDD:275380 3/22 (14%)
leucine-rich repeat 166..190 CDD:275380 10/23 (43%)
IQ 581..599 CDD:197470
Dnaaf11XP_038934705.1 leucine-rich repeat 8..35 CDD:275378 5/28 (18%)
PPP1R42 <37..179 CDD:455733 52/171 (30%)
leucine-rich repeat 37..59 CDD:275378 8/21 (38%)
leucine-rich repeat 60..81 CDD:275378 7/20 (35%)
leucine-rich repeat 82..103 CDD:275378 11/44 (25%)
leucine-rich repeat 104..128 CDD:275378 10/23 (43%)
Blue background indicates that the domain is not in the aligned region.

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