DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and sds-22

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_495653.1 Gene:sds-22 / 174266 WormBaseID:WBGene00011637 Length:326 Species:Caenorhabditis elegans


Alignment Length:268 Identity:70/268 - (26%)
Similarity:123/268 - (45%) Gaps:46/268 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SIRQLILDENELQKIDNIDSYLKIETLSLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGLKEC 95
            ::..|.|.||:|.:|.:::|.:.:.:|.|:.|::.::.|:.:|..|..|.|..|.|..||.|:..
 Worm    82 TLTSLDLYENQLTEISHLESLVNLVSLDLSYNRIRQINGLDKLTKLETLYLVSNKIEKIENLEAL 146

  Fly    96 IHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSISDMSYLRNLKELYLHGNRLTHLRQCDK 160
            ..|::|.|..|.||.||::...|||:.|.:..|.|..:..:..|:.|..|.|.|||:..:...::
 Worm   147 TQLKLLELGDNRIKKIENIGHLVNLDELFIGKNKIRQLEGVETLQKLSVLSLPGNRIVKIENVEQ 211

  Fly   161 CLPTSLETLTLAKNSINDLNEICTLSHLSNLLSISIADNPCVTMINSLDGFDYRPFVLNWCMSLK 225
            .  .:|:.|.|:...:.|::.:   ..|:|||.:.:|:|                       .:|
 Worm   212 L--NNLKELYLSDQGLQDIHGV---EPLTNLLLLDVANN-----------------------EIK 248

  Fly   226 YIDGFVVDPIESLKAEWLYSQGRGRQFRVGEQQGLAKYLSSVCPLVGKALE---------NENDR 281
            ...|  |:.:|||...|. :..:...|...||....|.|.:|      .||         |:..|
 Worm   249 TFSG--VERLESLNDFWA-NDNKVESFSEIEQLSKLKGLQTV------YLERNPFYFNDTNQYRR 304

  Fly   282 KLRLILSK 289
            |:.:.|::
 Worm   305 KVMMTLTQ 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 70/268 (26%)
leucine-rich repeat 32..53 CDD:275380 7/20 (35%)
LRR_RI <49..189 CDD:238064 39/139 (28%)
LRR_4 76..115 CDD:289563 16/38 (42%)
leucine-rich repeat 76..97 CDD:275380 8/20 (40%)
LRR_8 97..152 CDD:290566 20/54 (37%)
LRR_4 97..137 CDD:289563 14/39 (36%)
leucine-rich repeat 98..119 CDD:275380 8/20 (40%)
leucine-rich repeat 120..141 CDD:275380 5/20 (25%)
LRR_8 140..200 CDD:290566 15/59 (25%)
leucine-rich repeat 142..165 CDD:275380 6/22 (27%)
leucine-rich repeat 166..190 CDD:275380 5/23 (22%)
IQ 581..599 CDD:197470
sds-22NP_495653.1 leucine-rich repeat 40..59 CDD:275380
leucine-rich repeat 60..82 CDD:275380 70/268 (26%)
LRR_8 82..137 CDD:290566 16/54 (30%)
LRR_4 83..123 CDD:289563 11/39 (28%)
leucine-rich repeat 83..104 CDD:275380 7/20 (35%)
LRR_4 104..144 CDD:289563 12/39 (31%)
leucine-rich repeat 105..126 CDD:275380 5/20 (25%)
LRR_8 125..181 CDD:290566 21/55 (38%)
LRR_4 125..167 CDD:289563 16/41 (39%)
leucine-rich repeat 127..148 CDD:275380 8/20 (40%)
leucine-rich repeat 149..170 CDD:275380 8/20 (40%)
leucine-rich repeat 171..192 CDD:275380 5/20 (25%)
leucine-rich repeat 193..214 CDD:275380 6/22 (27%)
leucine-rich repeat 215..236 CDD:275380 5/23 (22%)
leucine-rich repeat 256..283 CDD:275380 7/27 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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