DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cep97 and cntrl

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_004919852.2 Gene:cntrl / 100270771 XenbaseID:XB-GENE-959037 Length:2448 Species:Xenopus tropicalis


Alignment Length:990 Identity:200/990 - (20%)
Similarity:337/990 - (34%) Gaps:295/990 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 SKQKLKKVPKQDDA----------HSIRQLILDENELQKIDNIDSYLKIETLSLARNQLLRMYGV 70
            |...|..|.::.||          :.:....:.|:.:||....::...:.:|:|           
 Frog   131 SGYNLLDVTEESDAPEHDGEKTRGNEVGVRYITESLIQKQTKQENLAYVTSLNL----------- 184

  Fly    71 CRLHCL-RELNLSFNGILSIEGLKECIHLRVLNLEGNNIKTIEHLNTNVNLECLNLADNSIGSIS 134
                || :|....|.   .||.|::|..|.||||..|.|:.||.|...:.|..||||.|.|..|.
 Frog   185 ----CLAKEGGKKFK---FIENLEKCERLEVLNLSHNLIEKIEKLEKQIRLRELNLAYNKISKIE 242

  Fly   135 DMSYLRNLKELYLHGNRLTHLRQCDKCLPT-------SLETLTLAKNSINDLNEICTLSHLSNLL 192
            ...:::|||:|.|.||.:.|       :|.       ||..|.|.:|.|:.|.::..|..|.:|.
 Frog   243 HFEHMQNLKKLNLAGNEIEH-------IPVWVGKKLKSLTALNLKENRISSLQDVSRLKPLKDLT 300

  Fly   193 SISIADNPCVTMINSLDGFDYRPFVLNWCMSLKYIDGFVVDPIESLKAEWLYSQGRGRQFRVGE- 256
            ::|::|||    :::|.  .||.:.:....||..:|...|...|..:|.        .:|.:.| 
 Frog   301 TLSLSDNP----VSNLP--HYRLYTVFHLRSLNSLDAQPVTNQERQEAH--------ERFNLEEL 351

  Fly   257 ---QQGLAKYLSSVCPLVG------------------------------KALENENDRKLRLI-- 286
               ::.|.|.:|.:..|..                              |.||.|.:.|..::  
 Frog   352 EKLERELEKKISEIDELQNQKAKITGELQNQDELNRSLKQEALQQKKSYKELEQEMETKNEILKQ 416

  Fly   287 ----LSKAQHHQRQLQEEI----MDNANSSASTSPSSHRKKPTSRIQS-PRFSRLSGRQGSPESM 342
                |::|...|.:|::|:    :|     |...|..:.:.....::. |..|...|:.....:|
 Frog   417 KTVELTRACQKQYELEQELAFYKID-----AKFEPLGYFESENVEVEDVPGESPYIGKARYKRNM 476

  Fly   343 V--NSYHGNSSN----NSIVSDNGS--TNHSLQMSISLIENIK-NDGEGFSLAGSGMSSSVTTKT 398
            .  .|:..|.:.    ..|..|..|  .|..:|..|....::: .|.|....|..|..:.:..:.
 Frog   477 YARESFIANPAQPLQMGKIEPDEDSQIRNQQIQARIHTALDVELGDKERNIQAAQGKLADLQHEI 541

  Fly   399 YNS-----------------------TESTPRNITPNPYNDQTFISQTPS--------------- 425
            .||                       :|:....:..........::|...               
 Frog   542 LNSEKQILKATEELKELEDAVAQKKMSEAEKERLRQQLSGKIQLLNQLRQEALELEKQMEWQRRE 606

  Fly   426 -----------GGPLAAASKMVPVPETLMS-----------------------PDVCPAAVAQRV 456
                       |..||:.|.:.|....:.:                       .|:......:..
 Frog   607 MDKKHREIEDLGKHLASLSPLDPRHSHVKAQKAGKEQQLDMMDQNYRQLEGRLDDMLSRIAKETE 671

  Fly   457 TVTALNPQLHKTKINKNKDNKLNLPRVRSPQLKRNQSPTSSPRRMANKCSADNMQAPEKLQQSAV 521
            .:..|..||.:.:|..|:..|.:|..:.:...:..:|.....::..::|...:.:..:.||:...
 Frog   672 EIKDLEQQLTEGQIAANEALKRDLEGIIAGLQEYLESVKGQAKQAHDECRELHAEREDLLQRLTE 736

  Fly   522 LADSGGFSTDDDGEQINIEKLRA--IRKMAAQKQQQMHQEQLKQQVDNNL-NCQDRLIEHVTESS 583
            |        :::.:|:....|.|  :||..|:.:   |..|.:|:::.:| ..|..|.|:..|..
 Frog   737 L--------EEEKKQLEAVALEAEGMRKEIAELE---HSLQEQQELNESLRQAQGDLSEYEAELE 790

  Fly   584 AVTIQKMWRGYHTRKKTNKDIAERLQRRRTQEYIE------QLGKDM-----LLTKAQL------ 631
            |        ....|....|.:.|.|:||:...::|      :|.||.     .||||||      
 Frog   791 A--------QLKARDAEAKQLKEELERRKRLSHMESSALQAELEKDKQALENALTKAQLLEETDQ 847

  Fly   632 ENERKIQQL-QMQAINALWKK------------VSTMEVDPKGIPAAAEQGEDSNGGGSGHLSLD 683
            ||::.:.|: |:|..|...|:            |..: |.|:.|.|...:.:.....|.|.:   
 Frog   848 ENQKLLSQMDQLQGENDYLKEQLENFQAQLANAVDNL-VHPEQISARVSELKRKLQTGVGEI--- 908

  Fly   684 QNSAAVVNDLAKRCTMLTD----QVQMLQSSIGTIVNCLTMVCNLPQDAIKKQAEIIDCSSTQTD 744
                        |||..||    .:..||.....|:             .|.|.|..:....|..
 Frog   909 ------------RCTSPTDVLGRNLAELQQQFNEIL-------------AKSQEEKKEAQERQRK 948

  Fly   745 LIAVHTPQIEDLTNFPFTKTRPSTLALESK-------HEAAL---------------ACPKIDEL 787
            |........|.....|....|....|.|:|       :||.|               :..:|..|
 Frog   949 LQEEIAALQEKAKEAPAEYKRACNKAAEAKMQALKRQYEAKLRQLENEIQRLKGKLKSMEEIQGL 1013

  Fly   788 NDVDLKETQEDSENL 802
            .|..|.|..|:.|.|
 Frog  1014 ADQQLVEADEEREKL 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 5/24 (21%)
leucine-rich repeat 32..53 CDD:275380 3/20 (15%)
LRR_RI <49..189 CDD:238064 45/147 (31%)
LRR_4 76..115 CDD:289563 16/39 (41%)
leucine-rich repeat 76..97 CDD:275380 7/21 (33%)
LRR_8 97..152 CDD:290566 25/54 (46%)
LRR_4 97..137 CDD:289563 18/39 (46%)
leucine-rich repeat 98..119 CDD:275380 10/20 (50%)
leucine-rich repeat 120..141 CDD:275380 8/20 (40%)
LRR_8 140..200 CDD:290566 21/66 (32%)
leucine-rich repeat 142..165 CDD:275380 8/29 (28%)
leucine-rich repeat 166..190 CDD:275380 8/23 (35%)
IQ 581..599 CDD:197470 3/17 (18%)
cntrlXP_004919852.2 PPP1R42 197..340 CDD:411060 53/155 (34%)
leucine-rich repeat 206..227 CDD:275378 10/20 (50%)
leucine-rich repeat 228..249 CDD:275378 8/20 (40%)
leucine-rich repeat 250..273 CDD:275378 8/29 (28%)
leucine-rich repeat 274..298 CDD:275378 8/23 (35%)
leucine-rich repeat 299..312 CDD:275378 5/16 (31%)
SMC_prok_B <498..1133 CDD:274008 106/579 (18%)
Smc 1399..2229 CDD:224117
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.