DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cep97 and lrrc56

DIOPT Version :9

Sequence 1:NP_608811.2 Gene:Cep97 / 33610 FlyBaseID:FBgn0031575 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_009296335.1 Gene:lrrc56 / 100149369 ZFINID:ZDB-GENE-081223-1 Length:607 Species:Danio rerio


Alignment Length:596 Identity:131/596 - (21%)
Similarity:216/596 - (36%) Gaps:155/596 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DESGEEKHVLNLSKQKLKKVPKQDDAHSIRQL-ILDENELQKIDNIDSYL--------------- 52
            |.|.:....|.||.:.||.:...||...:..| :..:.....:||...||               
Zfish    34 DHSDKMMDQLCLSLEILKILSGSDDLQEVTSLEMCVDTRQDTLDNFGVYLPKLTQLKMNNSLISS 98

  Fly    53 ---------KIETLSLARNQLLRMYGVCRLHCLRELNLSFNGILSIEGLKECIHLRVLNLEGNNI 108
                     .::.|.|||..|..:.|:..|..|:||.:::|.|..:..:....:|.:|:|||||:
Zfish    99 VRDLGTSLSHLQILWLARCSLTDLEGLPALSSLKELYVAYNSISDLSPVSMLENLELLDLEGNNV 163

  Fly   109 KTIE---HLNTNVNLECLNLADNSIGSISD--------MSYLRNLKELYLHGNRLTHL---RQCD 159
            ..:.   :|.....|..|:|..|.:.:..|        .||...::||....|.|..:   .:..
Zfish   164 DELAQLWYLGCCEKLRTLSLEGNPVCTCPDSGKLEASHYSYRSVVRELIPQLNILDDVPVELEKS 228

  Fly   160 KCLPTSLETLTLAKNSINDLNEICTLSHL----------------SNLLSISIADNPCVTMINSL 208
            :|..:||...||.|.||.|.:.|..|.|.                ::.|.:.:.::| .::.|.|
Zfish   229 QCNGSSLLDWTLLKESIKDSSVIVDLDHRDAAIEERSVSESGIRPASALPLDLRNSP-RSLSNHL 292

  Fly   209 DGFDYRPF--------------VLNW-CMSLKYIDGFVV--DPIESLKAEWLYSQGRGRQFRVGE 256
            |......|              :||. ...|....|.|:  :|:::::|.....:.:..|.::..
Zfish   293 DSARPSTFCTGSRPGSAGSVLAILNHEASDLTNGVGTVLCGNPLQAVRARRQKIKLQNSQSQIQP 357

  Fly   257 QQGLAKYL-SSVCPLVGKALENENDRKLRLILSKAQHHQRQL------QEEIM------------ 302
            ...|:.|: .........:.::.:|....|...:.:|::..|      |.::|            
Zfish   358 STQLSSYIPEHTYDFEQSSSQDRSDVFAELRSWRIEHNKHLLAIEKDQQPQVMSIHHSDDEHDDE 422

  Fly   303 DNANSSASTSPSSHRKKPTSRIQSPRFSRLSGRQGSPESMVNSYHGNSSNNSIVSDNGSTNHSLQ 367
            |..|.|.:...|.....|.|.|||     ||..  |||.:           .:.|.:|.:     
Zfish   423 DKHNHSITRDASRDASSPDSSIQS-----LSPE--SPEML-----------RLTSSSGCS----- 464

  Fly   368 MSISLIENIKNDGEGFSLAGSGMSSSVTTKTY--------------NSTESTPRNITPNPYNDQT 418
            ||.|...|:.     ..|||. .::.:.|:.:              .:||:..||:...  |:.|
Zfish   465 MSPSPPPNVT-----LPLAGR-RTTQIRTRRFRPHKAEVSNLRLSKETTETDHRNLCVQ--NNTT 521

  Fly   419 FISQTPSGGPLAAASKMVPVPETLMSPDVCPAAVAQRVTVTALNPQLH----KTKINKNKDNKLN 479
            ..|       |.|..::|..|.   .|...||....|:.:|. |.||.    |..|:.|...|| 
Zfish   522 VTS-------LTAPPQIVHKPH---RPSTSPADSPLRMKITG-NQQLSEIQPKPIIHSNTSKKL- 574

  Fly   480 LPRVRSPQLKR 490
              ..|.||..|
Zfish   575 --PPRRPQTAR 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cep97NP_608811.2 leucine-rich repeat 11..31 CDD:275380 7/19 (37%)
leucine-rich repeat 32..53 CDD:275380 5/45 (11%)
LRR_RI <49..189 CDD:238064 45/193 (23%)
LRR_4 76..115 CDD:289563 12/41 (29%)
leucine-rich repeat 76..97 CDD:275380 5/20 (25%)
LRR_8 97..152 CDD:290566 18/65 (28%)
LRR_4 97..137 CDD:289563 13/50 (26%)
leucine-rich repeat 98..119 CDD:275380 8/23 (35%)
leucine-rich repeat 120..141 CDD:275380 7/28 (25%)
LRR_8 140..200 CDD:290566 17/78 (22%)
leucine-rich repeat 142..165 CDD:275380 5/25 (20%)
leucine-rich repeat 166..190 CDD:275380 10/39 (26%)
IQ 581..599 CDD:197470
lrrc56XP_009296335.1 leucine-rich repeat 86..108 CDD:275380 0/21 (0%)
LRR_9 88..229 CDD:258718 31/140 (22%)
LRR_4 108..148 CDD:289563 12/39 (31%)
leucine-rich repeat 109..130 CDD:275380 7/20 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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