DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slp2 and foxj1a

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001070174.2 Gene:foxj1a / 767737 ZFINID:ZDB-GENE-060929-1178 Length:458 Species:Danio rerio


Alignment Length:239 Identity:74/239 - (30%)
Similarity:101/239 - (42%) Gaps:58/239 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 NLNTTNWGSPEDH------EAESDPESDLDVTSMSPAPVANPNESD------------------- 138
            |.:|....||..|      :|.|.|.:....:...|.....|..:.                   
Zfish    65 NASTGQHTSPSSHSHLMGSDAPSSPLAGDPASIGMPLTPGKPTAASFCRVPMFSALPSLVAHGHC 129

  Fly   139 PDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTL 203
            |||||                    .|||.         :.||||||..||.||::.|.:.::||
Zfish   130 PDEVD--------------------YKSNP---------HIKPPYSYATLICMAMQASKKTKITL 165

  Fly   204 NGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGS 268
            :.||::|..|..|:|.....|||||||||||||||:||||..|:||||.:|.:||...:..:..:
Zfish   166 SCIYKWITDNFCYFRHADPTWQNSIRHNLSLNKCFIKVPRQKDEPGKGGFWKIDPQYAERLLNEA 230

  Fly   269 TGKLRR---RTTAASRSRLAAFKRSLIGPMFPGLAAYPQFGQFL 309
            ..|.|.   :...|.:.|| .......|.:...|:..|:..|.|
Zfish   231 YKKRRLPPVQINPALQHRL-RMNAQATGVISRNLSVSPESQQLL 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 44/77 (57%)
foxj1aNP_001070174.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 68..99 7/30 (23%)
FH_FOXJ1 142..220 CDD:410797 44/77 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 305..324
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.