DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and Foxf1

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001387935.1 Gene:Foxf1 / 687536 RGDID:1584229 Length:378 Species:Rattus norvegicus


Alignment Length:356 Identity:103/356 - (28%)
Similarity:140/356 - (39%) Gaps:111/356 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 GETTDGDAENKSNDGKPVKDKKGN------EKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTN 213
            |....|.|.:.:..| |.|.||.|      |||||||.|||:|||:.|..|||||:.||:::...
  Rat    18 GGGAGGQAMDPAAAG-PTKAKKTNAGVRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQAR 81

  Fly   214 HPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTA 278
            .|::|...|||:||:|||||||:||:|:|:....||||:||.:||::|.:|..||.    ||...
  Rat    82 FPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSF----RRRPR 142

  Fly   279 ASRSRLAAFKRSLIGPMFPGLAAYPQFGQFLTYPPT-----------APSLLA------------ 320
            ..|.:..|.|.  :..|..||.       |...|.|           ||:.||            
  Rat   143 GFRRKCQALKP--VYSMVNGLG-------FNHLPDTYGFQGSGGLSCAPNSLALEGGLGMMNGHL 198

  Fly   321 -------SMYQRYNPFAPKGG-----------------------PGHPGLPPGLPGLPGPPGPQG 355
                   ::.....|..|..|                       |..|.||.|..|:..|.....
  Rat   199 TGNVDGMALPSHSVPHLPSNGGHSYMGGCGGSAAGEYPHHDSSVPASPLLPAGAGGVMEPHAVYS 263

  Fly   356 PPGPPPPPFVAPPTSSELYQRLQYQQLLHQHAAAAAL---AAHQRQLSVAAASAASQP------- 410
            ......||                       ||:|||   |::.:|..::..:.|:.|       
  Rat   264 SSAAAWPP-----------------------AASAALNSGASYIKQQPLSPCNPAANPLSGSIST 305

  Fly   411 -----PPTHHHPHLAVGQAPLSPGGDSPGPS 436
                 |..|.:.|....:....|...|..||
  Rat   306 HSLDQPYLHQNSHNGPAELQGIPRYHSQSPS 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 44/77 (57%)
Foxf1NP_001387935.1 FH_FOXF1 49..147 CDD:410823 52/101 (51%)

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