DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and fkh

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001263038.1 Gene:fkh / 43383 FlyBaseID:FBgn0000659 Length:692 Species:Drosophila melanogaster


Alignment Length:504 Identity:115/504 - (22%)
Similarity:186/504 - (36%) Gaps:161/504 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 PLPPTTHHSALQSPHPVGLNLTNLMKMARTPHLKSSFSI-----NSILPE---TVEHHDEDEEED 82
            |.||:.:     :|:|.. |..::..:||:.:..:|..:     :|:.|:   |......|....
  Fly    41 PPPPSNN-----NPNPTS-NGGSMSPLARSAYTMNSMGLPVGGMSSVSPQAAATFSSSVLDSAAA 99

  Fly    83 VEKKS-------PAKFPPNHNN-----------------NNLNTTNWGSPEDHEAESDPESDLDV 123
            |...|       .|....:.|.                 ::::..:.|||..:....   ..:..
  Fly   100 VASMSASMSASMSASMNASMNGSMGAAAMNSMGGNCMTPSSMSYASMGSPLGNMGGC---MAMSA 161

  Fly   124 TSMSPAPVANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKG--NEKPPYSYN 186
            .|||.|.::....:.|....|.          ||...::..:|...||...::.  :.||||||.
  Fly   162 ASMSAAGLSGTYGAMPPGSREM----------ETGSPNSLGRSRVDKPTTYRRSYTHAKPPYSYI 216

  Fly   187 ALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKG 251
            :||.|||:.:..:.|||:.||::||...|:||.|:|.|||||||:||.|.||||:||..|.||||
  Fly   217 SLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKG 281

  Fly   252 NYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGLAAYPQFGQFLTYPPTAP 316
            ::|.|.|.:.::|..|...:.::|.....:..:....:|                          
  Fly   282 SFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQLHKS-------------------------- 320

  Fly   317 SLLASMYQRYNPFAPKGGPGHPGLPPGLPGLPGPPGPQGPPGPPPPPFVAPPTSSEL----YQRL 377
                              |.|..|....||...                 ...|..:    :.||
  Fly   321 ------------------PSHSSLEATSPGKKD-----------------HEDSHHMHHHHHSRL 350

  Fly   378 QYQQLLHQHAAAAAL-------AAHQRQ---LSVAAASA----ASQP---PPTHHHPHLAVGQAP 425
            .:.| .|:.|..|::       |||.:.   |::..|:|    :.||   |..|||.|..:.|..
  Fly   351 DHHQ-HHKEAGGASIAGVNVLSAAHSKDAEALAMLHANAELCLSQQPQHVPTHHHHQHHQLQQEE 414

  Fly   426 LS-------------------------PGGDSPGPSPQPLHKPVTVVSR 449
            ||                         |.|.:|...|..:::.:...|:
  Fly   415 LSAMMANRCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLPTESK 463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 47/84 (56%)
fkhNP_001263038.1 Forkhead_N <120..209 CDD:254796 15/101 (15%)
FH 210..298 CDD:214627 48/87 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445510
Domainoid 1 1.000 104 1.000 Domainoid score I1720
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 1 1.000 - - otm46522
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.840

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