DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and foxa1

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_989419.1 Gene:foxa1 / 395059 XenbaseID:XB-GENE-487352 Length:428 Species:Xenopus tropicalis


Alignment Length:354 Identity:98/354 - (27%)
Similarity:136/354 - (38%) Gaps:120/354 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 SPEDHEAESDPESDLDVTSMSPA-PVANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGK 170
            ||....|.|..::.::..|.|.. |..:|....|..:                     |::.|.|
 Frog   105 SPSSMNAMSAQQASINSLSYSGMNPGMSPMAYGPSNM---------------------NRTRDTK 148

  Fly   171 PVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLN 235
            ..:....:.||||||.:||.|||:|:..|.|||:.||::||....|||.|:|.|||||||:||.|
 Frog   149 TFRRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFLYYRQNQQRWQNSIRHSLSFN 213

  Fly   236 KCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGS-------------------------------- 268
            .|||||.|..|.||||:||.|.|.:.::|..|.                                
 Frog   214 DCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQQGGKGSQDGRKDVSGPSSP 278

  Fly   269 ----TGKLRRRTTAASRSRLAAFKRSL-----IGPMFPGLAAYPQFGQFLTYPPTAPSLLASMYQ 324
                .||..:..:::|.|..::..:||     .|.|.|.:||             .||.|:| :|
 Frog   279 LHRVHGKSSQMDSSSSMSNPSSSPQSLEHNGSNGEMKPQVAA-------------GPSPLSS-HQ 329

  Fly   325 RYNPFA--------PKGGP----GHP-----------------------------GLPPGLPGLP 348
            .::..:        .||.|    .||                             ....||||:|
 Frog   330 NHSTHSLAHETHIHLKGDPHYSFNHPFSINNLMSSSEQQHKLDFKAYEQALQQYSSYSGGLPGMP 394

  Fly   349 -GPPGPQGPPGPPPPPFVAPPTSSELYQR 376
             |.|...| .|...|..:.|.....:|.|
 Frog   395 LGSPSMAG-RGSIEPSALEPTYYQGVYSR 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 50/84 (60%)
foxa1NP_989419.1 Forkhead_N 17..157 CDD:369872 12/72 (17%)
FH 158..246 CDD:214627 51/87 (59%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..337 16/93 (17%)
HNF_C 354..417 CDD:370449 13/63 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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