DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slp2 and bin

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_523950.2 Gene:bin / 38766 FlyBaseID:FBgn0045759 Length:676 Species:Drosophila melanogaster


Alignment Length:571 Identity:132/571 - (23%)
Similarity:194/571 - (33%) Gaps:159/571 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 PSSEISAHSLHFQH-------HHHPLPP-----TTHHSALQSPHPVGLNLTNLMKMARTPHLKSS 61
            |.|....:||...|       ...|:||     |.|.:...||.......|:|.:..:  :..||
  Fly    97 PVSAAQHYSLSALHSMGTPPASSSPIPPYGVLMTAHSAGSASPQSNSKTPTDLPQDLQ--YASSS 159

  Fly    62 FSINSILP-------------ETVEHHDED------------EEEDVEKKSPAKFPPNHNNNN-- 99
            .|...:.|             .|:::...:            .:|...::.|.:.|.....::  
  Fly   160 TSTAKVQPLQVQLQPLNHQYASTIKYCSNNTILSANDYQLLTSQEQAGQQQPQQLPAQQLQHSPG 224

  Fly   100 ------LNTTNWGSPED--HEAESDPESDLDVTSMSPAPVANPNESDPDEVDEEFVEEDIECDGE 156
                  ::|    ||..  ..|...|..:...:|.|||...|.:||.|.  .:..:|..:.....
  Fly   225 GGYMSRIST----SPSQVISNAHGMPVLNYSSSSSSPAKSLNGSESSPP--SQNHLENKVSGSAV 283

  Fly   157 TTDGDAENKSNDGKPVKDKKGN----EKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYY 217
            ...|.:..:.....|...||..    |||..||..:|..||::|...:|||:.||.|:..::.::
  Fly   284 VGTGGSSQQDAPSTPDTTKKSGTRRPEKPALSYINMIGHAIKESPTGKLTLSEIYAYLQKSYEFF 348

  Fly   218 RDNKQGWQNSIRHNLSLNKCFVKVPR--HYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAAS 280
            |....||:||:|||||||:||.|:|:  ....|||||||.:|.::..:|  ...|.|||| ....
  Fly   349 RGPYVGWKNSVRHNLSLNECFKKLPKGMGVGKPGKGNYWTIDENSAHLF--EDEGSLRRR-PRGY 410

  Fly   281 RSRLA---------AFKRSLIGP---------MFPGLAAY-----------PQFGQFLTYPPTAP 316
            ||::.         .:..|..|.         ..|..|:|           |..||....|    
  Fly   411 RSKIKVKPYAGHANGYYASGYGDAGMDNGNYYASPAFASYDYSAAGATGVSPAGGQGFADP---- 471

  Fly   317 SLLASMYQRYNPFAPKGGPGHPGLPPGLPGLP---------GPPGPQGPPGPPPPPF----VAPP 368
                     :|..|...|....|:..|:..||         ......|....||...    :||.
  Fly   472 ---------WNAHAAHSGSSSVGVGMGVGPLPQYTNISCLAAGGNVNGSATTPPLAHSALGMAPS 527

  Fly   369 TSSELYQRLQYQQLLHQHAAAAALAA-------------------HQRQL----SVAAASAASQP 410
            .||..........|...:|..|:|.|                   ..:||    |:..|.|.:|.
  Fly   528 ASSSSSPLGAAATLQSDYAPTASLVAAGYSYATSAGSLDNGLRSISLQQLPGLSSIQHAQAQAQA 592

  Fly   411 PPTHH----------HPHLAVGQAPLSPGGDSPGPSPQPL-------HKPV 444
            ...||          |.|...|....:.|..|..|.|...       |.|:
  Fly   593 QAHHHHHQHHASHPSHSHQGHGSMHQNHGTSSTTPPPSQSGGSHGIDHSPI 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 38/86 (44%)
binNP_523950.2 Forkhead 311..399 CDD:278670 39/89 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45445455
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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