DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and Foxd2

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001386132.1 Gene:Foxd2 / 313504 RGDID:1304642 Length:494 Species:Rattus norvegicus


Alignment Length:387 Identity:129/387 - (33%)
Similarity:153/387 - (39%) Gaps:113/387 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   113 AESDPESDLDVTS--------------MSPAPVANPNESDPDEVDEEFVEEDIECDGETTD---- 159
            |.|:|::|:||..              .:|..|.......|.|..|..|.||.|..|..:|    
  Rat    19 ALSEPDADIDVVGGGSGGGELTARSGPRAPRDVLPHGHELPPEEAEADVAEDEEESGGCSDCEPR 83

  Fly   160 -----GDAENKSNDGKPVKDKKGNE----------------------KPPYSYNALIMMAIRQSS 197
                 |.|....:.|..|:..:|..                      ||||||.|||.|||.||.
  Rat    84 ALGPRGAAAAAGSPGPGVQAARGATGPGPGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSP 148

  Fly   198 EKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAED 262
            :|||||:.|.|:|....||||:....||||||||||||.||||:||...:|||||||.|||.:.|
  Rat   149 KKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESAD 213

  Fly   263 VFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFP------------GLAAYPQFGQFLTYPPTA 315
            :|..||..:.|:|           |||..:.|..|            |.||....|.||      
  Rat   214 MFDNGSFLRRRKR-----------FKRQPLPPPHPHPHPHPELLLRGGAAAAGDPGAFL------ 261

  Fly   316 PSLLASMYQRYNPFAPKGGPGHPGLPPGLPGLPGPPGPQGPPGPPPPPFVAPPTSSELYQRLQYQ 380
                       :.||..|..|: |....||....|     ||||.|.|                 
  Rat   262 -----------SGFAAYGAYGY-GYGLALPAYGAP-----PPGPAPHP----------------- 292

  Fly   381 QLLHQHAAAAALAAHQR-QLSVAAASAASQPP-PTHHHPHLAVGQAPLSPGGDSPGPSPQPL 440
               |.|..|.|.||... ||||....||:.|| |.......:...||........||||..|
  Rat   293 ---HPHPHAFAFAATAPCQLSVPPGRAAAPPPGPPTASVFASATSAPAPAPAPGSGPSPAGL 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 52/77 (68%)
Foxd2NP_001386132.1 FH_FOXD1_D2-like 131..229 CDD:410820 61/108 (56%)

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