DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and foxd3

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_571365.2 Gene:foxd3 / 30548 ZFINID:ZDB-GENE-980526-143 Length:371 Species:Danio rerio


Alignment Length:363 Identity:130/363 - (35%)
Similarity:162/363 - (44%) Gaps:94/363 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 EAESDPESDLDVTSMSPAPVANPNESDPDEVDEEFVEE--DIEC----DGETTDGDAENKSNDGK 170
            |.:...|.|.|..|..       .:...|||:|..|:|  |..|    ||| |.|||:..|....
Zfish    30 EGDEGMEQDSDCESQC-------MQDRGDEVEEIEVKERSDSPCESNADGE-TKGDAQESSTGPM 86

  Fly   171 PVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLN 235
            ..|.|....||||||.|||.|||.||.:|:|||:||.|:|....||||:....||||||||||||
Zfish    87 QNKPKSSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLN 151

  Fly   236 KCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGLA 300
            .||||:||...:|||||||.|||.:||:|..||..:.|:|           |||.          
Zfish   152 DCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKR-----------FKRH---------- 195

  Fly   301 AYPQFGQFLTYPPTAPSLL----ASMYQRYNPFAPKGGPGHP-----GLPPG---------LPGL 347
                          .|.:|    |.|.|.:..:    |.|:|     |:.|.         .|.:
Zfish   196 --------------QPDILRDQTALMMQSFGAY----GIGNPYGRHYGIHPAAYTHPAALQYPYI 242

  Fly   348 PGPPGPQGPPGPPPPPFVAPPTSSELYQRLQYQQLLHQHAAAAALAAHQRQL-SVAAASAASQPP 411
            | |.||..||..|..|      |:||.::....||      :.:|   |.|| |::.||.....|
Zfish   243 P-PVGPMLPPAVPLLP------SAELNRKAFSSQL------SPSL---QLQLNSLSTASIIKSEP 291

  Fly   412 PTHHHPHLAVGQAPLSPGGDSPGPSPQP-LHKPVTVVS 448
            .:  .|..::...   .|..|...|.|. |..||||.|
Zfish   292 SS--RPSFSIENI---IGVSSSSTSAQTFLRPPVTVQS 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 52/77 (68%)
foxd3NP_571365.2 FH_FOXD3 95..191 CDD:410821 60/95 (63%)

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