DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and foxd2

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_571346.2 Gene:foxd2 / 30525 ZFINID:ZDB-GENE-980605-6 Length:369 Species:Danio rerio


Alignment Length:358 Identity:115/358 - (32%)
Similarity:149/358 - (41%) Gaps:90/358 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 DPESDLDVTSMSPAPVANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKGNE- 179
            |.:||.:::..:.....:|.:|            .::|..:.. |..:: |..|....||.|.. 
Zfish    42 DNDSDDNLSQNAGEGAISPGQS------------SLDCPADRV-GQRDD-SRTGALTGDKPGKNA 92

  Fly   180 --KPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVP 242
              ||||||.|||.|||.||.:|||||:.|.|:|....||||:....||||||||||||.||||:|
Zfish    93 LVKPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIP 157

  Fly   243 RHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRR-----TTAASRSR---LAAFKRSLIG------ 293
            |...:|||||||.|||.:.|:|..||..:.|:|     |....|..   |..|.....|      
Zfish   158 REPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRHQTNEILREAGGFLPGFGYGPYGYNYGLQ 222

  Fly   294 -----------PMFPGLA--------AYPQFGQFLTYPPTAPSLLASMYQRYNPFAPKGGPGHPG 339
                       |..||.|        |.|......:.|.:.||.|.:..::  ||.|:..|..||
Zfish   223 LQNFHAHHPYHPHHPGSAFPFQNTHCALPTPSSIFSTPHSLPSFLGTELRK--PFYPQLSPTLPG 285

  Fly   340 LPPGLPGLPGPPGPQ-------GPPGPPPPPFVAPPTSSELYQRLQYQQLLHQHAAAAALAAHQR 397
            |.|......||..|.       |....|..|:...|                  |..|.:.|   
Zfish   286 LAPLKTDTNGPSRPSFSIDNIIGAASSPASPYTTQP------------------AGQAQILA--- 329

  Fly   398 QLSVAAASAASQPPPTHHHPHLAVGQ-APLSPG 429
            .|:...|||.:         ||::.| ..|.||
Zfish   330 MLTPTLASATN---------HLSITQETMLQPG 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 52/77 (68%)
foxd2NP_571346.2 FH_FOXD1_D2-like 95..193 CDD:410820 60/97 (62%)

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