DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and Foxd3

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_008762182.2 Gene:Foxd3 / 29203 RGDID:621715 Length:469 Species:Rattus norvegicus


Alignment Length:419 Identity:140/419 - (33%)
Similarity:187/419 - (44%) Gaps:85/419 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 EDEEEDVEKKSPAKFPPNHNNNNLNTTNWGSPED-HEAESDPESDLDVTSMSPAPVANPNESDPD 140
            |:::.|....|||. ||   :..|:..:.|.|.. |..:|.|:: |.:.|.:..|   .|::...
  Rat    36 EEKDSDAGCDSPAG-PP---DLRLDEADEGLPASAHHGQSQPQA-LALPSEATGP---GNDTGAP 92

  Fly   141 EVDEEFVEEDIECDG--ETTDGDAENKSNDG-----KPVKDKKGNEKPPYSYNALIMMAIRQSSE 198
            |.|        .|.|  :...|.....:..|     .|.|.|....||||||.|||.|||.||.:
  Rat    93 EAD--------GCKGGEDAVTGGGGPGAGGGATGGLTPNKPKNSLVKPPYSYIALITMAILQSPQ 149

  Fly   199 KRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDV 263
            |:|||:||.|:|....||||:....||||||||||||.||||:||...:|||||||.|||.:||:
  Rat   150 KKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDM 214

  Fly   264 FIGGSTGKLRRR-----------TTAASRSRLAAFK---RSLIGP------MFPGLAAYPQFGQF 308
            |..||..:.|:|           .||.......|:.   .:..||      :.|..||    |.:
  Rat   215 FDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAASAGPYGRPYGLHPAAAA----GAY 275

  Fly   309 LTYPPTAPSLLASMYQRYNPFA-PKGGPGHPGLPPGLPGLPGPPGPQGPPGPPPPPFVAPPTSSE 372
             ::|..|.:..|:...:| |:| |   |..|.|||.:|.|     |.|..|.....|     .|:
  Rat   276 -SHPAAAAAAAAAAALQY-PYALP---PVAPVLPPAVPLL-----PSGELGRKAAAF-----GSQ 325

  Fly   373 LYQRLQYQ-QLLHQHAAAAALAAHQRQLSVAAASAASQPPPTHHHPHLAVGQAPLSP-------- 428
            |...||.| ..|...||||..|......|:..:..:::|..:..:   .:|..|.:|        
  Rat   326 LGPSLQLQLNTLGAAAAAAGTAGAAGTTSLIKSEPSARPSFSIEN---IIGAGPAAPGSSAGGGG 387

  Fly   429 --------GGDSPGPSPQP-LHKPVTVVS 448
                    ||...|.|.|. |..|.||.|
  Rat   388 SAGGAGGGGGSGGGGSAQSFLRPPGTVQS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 56/84 (67%)
Foxd3XP_008762182.2 FH_FOXD3 130..226 CDD:410821 60/95 (63%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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