DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and Foxd4

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_001055972.2 Gene:Foxd4 / 252886 RGDID:621716 Length:432 Species:Rattus norvegicus


Alignment Length:438 Identity:125/438 - (28%)
Similarity:154/438 - (35%) Gaps:163/438 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 SPEDHEAESDPES-DLDVTSMSPAPVANPNESDPDEVDEEFVEEDIEC-------DGETT----- 158
            :|......||||. ::||.:         .|.|.|:.:::..||..:|       .|..|     
  Rat    12 TPPPSPLSSDPEEVEIDVLA---------EEEDGDQTEDDGGEESHKCLERSLQRPGARTLARRS 67

  Fly   159 ---DGDAENKSN-----------------DG-KPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLT 202
               .||..|.|.                 || :|.       ||||||.|||.|||.||..||||
  Rat    68 AWDCGDLSNSSGFLRKFRAPRTRATTTTADGPQPA-------KPPYSYIALITMAILQSPHKRLT 125

  Fly   203 LNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGG 267
            |:||..:|....||||.....||||||||||||.||||:||....|||||||.|||:::|:|..|
  Rat   126 LSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSLDPASQDMFDNG 190

  Fly   268 STGKLRRRTTAASRSRLAAFKR-----------SLIGPMFPGLAAYPQFGQFLTY-PPTAPSLLA 320
            |..:.|:|           |||           ....|..|......|.|..|.| .|..|:|..
  Rat   191 SFLRRRKR-----------FKRHHPPPGGHPHCPFPPPAVPATVQVSQPGLLLRYSAPPQPNLAV 244

  Fly   321 --SMYQRYNPFAP---------------------KGGPGHPGLPPGLPGLPGPPG---------- 352
              :...|..|.||                     |.....|.....:|.|...||          
  Rat   245 HPASPPRSRPCAPLHPYPLRYLLLAAPAYADEPRKAEGADPATSLAIPALQPAPGSQPWEGDQGS 309

  Fly   353 ---------------------------PQGPPGPP---------PPPFVAPPTSSELYQRLQYQQ 381
                                       .|.||..|         ||..:.|..:|.|:       
  Rat   310 GSRSRRGCASFTIESIMQGVTGGGTGSAQSPPFAPWSYCHLLQHPPCLLHPQAASPLF------- 367

  Fly   382 LLHQHAAAAALAAHQRQLSVAAASAASQPPPTHHHPHLAVGQAPLSPG 429
                |..||:....|:|        ..:||| ....|....:.  |||
  Rat   368 ----HVPAASRTVLQQQ--------QPRPPPXQQEEHHCAIRC--SPG 401

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 52/77 (68%)
Foxd4XP_001055972.2 FH_FOXD4-like 103..198 CDD:410822 59/94 (63%)
flhF 213..>297 CDD:235904 17/83 (20%)

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