DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and Foxe1

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_620264.1 Gene:Foxe1 / 192274 RGDID:621723 Length:370 Species:Rattus norvegicus


Alignment Length:338 Identity:114/338 - (33%)
Similarity:141/338 - (41%) Gaps:83/338 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 APVANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKGNEKPPYSYNALIMMAI 193
            |..|.|....|:.:.....|......|.....:...:...|:..|......||||||.|||.|||
  Rat     3 AESAPPPPPQPEALAAVKEERGEAAAGAGVPAEVAGRGAGGRRRKRPLQRGKPPYSYIALIAMAI 67

  Fly   194 RQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDP 258
            ..:.|:||||.|||::|....|:||||.:.|||||||||:||.||:|:||....|||||||.|||
  Rat    68 AHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDP 132

  Fly   259 SAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLIGPMFPGLAAYPQFGQFLTYPPTAPSLLASMY 323
            :|||:|..||..:.|:|           ||||       .|:.||      .|...|.:..|:..
  Rat   133 NAEDMFESGSFLRRRKR-----------FKRS-------DLSTYP------AYMHDAAAAAAAAA 173

  Fly   324 QRYNPFA-PKGGPGHPG------LPPGLPGLPGPPG---PQGPPGP----------PPPPFVAPP 368
            ....|.| |...|.:||      .||    |..||.   |...|||          |..|.:.|.
  Rat   174 AAIFPGAVPAARPAYPGAVYAGYAPP----LAAPPPVYYPAASPGPCRVFGLVPERPLSPDLGPA 234

  Fly   369 TSSELYQRLQYQQLLHQHAAAAALAAHQRQLSVAAASAASQPPPTHHHPHLAVGQAPLSP----- 428
            .|                 ||..        |.|.|:||..|......|.:..|..|::|     
  Rat   235 PS-----------------AAGG--------SCAFAAAAGAPGTGSFQPAVCTGARPVNPAAYAA 274

  Fly   429 ---GGDSPGPSPQ 438
               |.|  |..||
  Rat   275 AYAGPD--GAYPQ 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 50/77 (65%)
Foxe1NP_620264.1 FH_FOXE 54..142 CDD:410793 56/87 (64%)

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