DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slp2 and Foxd1

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_032268.2 Gene:Foxd1 / 15229 MGIID:1347463 Length:456 Species:Mus musculus


Alignment Length:434 Identity:143/434 - (32%)
Similarity:183/434 - (42%) Gaps:97/434 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EHHDEDEEEDVEKK-------SPAKFPPNHNNNNLNTTNWGSPEDHEAESDPESDLDVTSMSPAP 130
            |..|::||||.:.:       ..::.|.:......:.......||.|.|.|  .||.:.|...|.
Mouse    24 EGEDDEEEEDDDDEGGGGRGGGGSRLPSSAQRRRRSYAGEDDLEDLEEEDD--DDLLLASRPAAS 86

  Fly   131 VANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKGNEKPPYSYNALIMMAIRQ 195
            .|.|..:........      .|.|....|.|...:..|.....|....||||||.|||.|||.|
Mouse    87 PAPPGPAPAPGTGSG------GCSGAGAGGGAGGGTGAGTGGGAKNPLVKPPYSYIALITMAILQ 145

  Fly   196 SSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNYWMLDPSA 260
            |.:|||||:.|.|:|.:..||||:....||||||||||||.||||:||...:|||||||.|||.:
Mouse   146 SPKKRLTLSEICEFISSRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPES 210

  Fly   261 EDVFIGGSTGKLRRRTTAASRSRLA--AFKRSLI----GPMF----PGLAAYPQFGQFLTYPPTA 315
            .|:|..||.  ||||.....:..||  |...:|:    ||..    ||.|.:|        ||..
Mouse   211 ADMFDNGSF--LRRRKRFKRQPLLAPHAAAEALLLRGAGPAAGAGDPGAALFP--------PPPP 265

  Fly   316 PSLLASMYQRYNPFAPKGGPGHPGLPPGLPGLP--GPPG---------------PQGPPGPPPPP 363
            |              |..|.|..|...||. ||  .||.               |..||.|||||
Mouse   266 P--------------PACGYGAYGCAYGLQ-LPPCAPPSALFAAAAAAAAAAFHPHSPPPPPPPP 315

  Fly   364 FVAPPTSSELYQ-RLQYQQLLHQHAAAAALAAHQRQLSVAA----ASAASQPP------------ 411
            ...|..::||.: ...|:    .||.||||....:..:|.|    |:|.::.|            
Mouse   316 PPPPGAAAELARTAFGYR----SHALAAALPGPLQAAAVKAGGPGAAALARSPFSIESLIGRTRG 376

  Fly   412 PTHHHPHLAVGQAPLSPGGDSPGP-----SPQPLHKPVTVVSRN 450
            |.....|::.|.|    .|.:|||     :.|....|...::|:
Mouse   377 PAAAGAHVSSGAA----SGTAPGPGGGGCAVQAAAGPAVALTRS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 55/84 (65%)
Foxd1NP_032268.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..104 18/87 (21%)
Forkhead 130..216 CDD:278670 56/85 (66%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..322 9/18 (50%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 381..401 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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