DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and foxb2

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_004921500.2 Gene:foxb2 / 101730239 XenbaseID:XB-GENE-1021718 Length:317 Species:Xenopus tropicalis


Alignment Length:284 Identity:88/284 - (30%)
Similarity:112/284 - (39%) Gaps:86/284 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 KPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSL 234
            :|.|.....:||||||.:|..|||:.|.||.|.|:.||::||...||||:|.|.||||:|||||.
 Frog     3 RPGKSSYSEQKPPYSYISLTAMAIQSSQEKMLPLSDIYKFIMDRFPYYRENTQRWQNSLRHNLSF 67

  Fly   235 NKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRSLI------- 292
            |.||:|:||..|.||||::|.|.|...|:|..||..:.|:|........||:....:|       
 Frog    68 NDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVVRAEHLASKSHQMIHYFHHQH 132

  Fly   293 -----------GPMFPGLAAYPQFGQF-------------------------------------- 308
                       |...|.|...|.|..:                                      
 Frog   133 NQTKLGIPASEGSPVPSLGRLPHFQPYNIANMSGSQTSGFKHPFAIENIIGRDYKGVMTGGLPLA 197

  Fly   309 -----LTYPPTAPSLLASMYQRYNP-------FAPKGGP---GHPGLP------------PGLPG 346
                 |.||  .||.|::|.....|       .|....|   ||.|:|            |.:| 
 Frog   198 SMMHHLGYP--VPSQLSNMVSSMWPHVGMMDSMASMTVPQEYGHFGVPMKTLCHAPSQTIPAVP- 259

  Fly   347 LPGPPGPQGPPGPPPPPFVAPPTS 370
            ||..|....||....|.....|:|
 Frog   260 LPIKPTASLPPVSALPSLAVNPSS 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 49/84 (58%)
foxb2XP_004921500.2 FH_FOXB2 1..110 CDD:410817 56/106 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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