DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and foxd2

DIOPT Version :10

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:XP_002931458.1 Gene:foxd2 / 100495241 XenbaseID:XB-GENE-479818 Length:348 Species:Xenopus tropicalis


Alignment Length:415 Identity:121/415 - (29%)
Similarity:159/415 - (38%) Gaps:111/415 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LKSSFSINSILPETVEHHDEDEEEDVEKKSPAKFPPNHNNNNLNTTNWGSPEDHEAESDPESDLD 122
            |.:..|.||:|.|..   |.|...|:..|. .|:...|::|:   ::...|..|  ..||.|   
 Frog     3 LGTEMSDNSLLSEDT---DIDVVGDMGAKD-GKYSDYHSDND---SDDNGPRTH--RGDPAS--- 55

  Fly   123 VTSMSPAPVANPNESDPDEVDEEFVEEDIECDGETTDGDAENKSNDGKPVKDKKGNEKPPYSYNA 187
                            ||                .:.|...|:..:..|   |....||||||.|
 Frog    56 ----------------PD----------------LSSGSESNQRAEKPP---KNALVKPPYSYIA 85

  Fly   188 LIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGN 252
            ||.|||.||.:|||||:.|.|:|....||||:....||||||||||||.||||:||...:|||||
 Frog    86 LITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGN 150

  Fly   253 YWMLDPSAEDVFIGGSTGKLRRRTTAASRSRLAAFKRS-----LIGP--MFPGLAAYPQFGQFLT 310
            ||.|||.:.|:|..||..:.|:|           |||.     |..|  ..|....|..:|  ..
 Frog   151 YWTLDPESADMFDNGSFLRRRKR-----------FKRQQSNEILRDPSSFMPAAFGYGPYG--YN 202

  Fly   311 YPPTAPSLLASMYQRYNPFAPKGG-----PGHPGLPPGLPGLPGPPGPQGPPGPPPPPFVAPPTS 370
            |        ....|.|:.....|.     |.|..|||             |......|.::|...
 Frog   203 Y--------GLQLQNYHQHHHTGATFSFQPTHCPLPP-------------PASVFSSPTLSPFLG 246

  Fly   371 SELYQRLQYQQL-----LHQHAAAAALAAHQRQLSVAAASAASQPPPTHHHPHLAVGQAPLSPGG 430
            :||.::..|.||     :.|.......:.....:......:.|.|.||..:        .:.||.
 Frog   247 NELTRKSFYSQLSPTLPILQTLKPDGQSRPSFSIDNIIGGSGSTPSPTSPY--------TVQPGN 303

  Fly   431 DSP-----GPSPQPLHKPVTVVSRN 450
            ..|     .||..|:...:.:...|
 Frog   304 QPPVIAMLSPSLAPMQNHLNLSHEN 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 FH_FOXG 180..258 CDD:410795 52/77 (68%)
foxd2XP_002931458.1 FH_FOXD1_D2-like 78..176 CDD:410820 61/108 (56%)

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