DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp2 and foxb1

DIOPT Version :9

Sequence 1:NP_476834.1 Gene:slp2 / 33608 FlyBaseID:FBgn0004567 Length:451 Species:Drosophila melanogaster
Sequence 2:NP_001107970.1 Gene:foxb1 / 100125219 XenbaseID:XB-GENE-1018255 Length:322 Species:Xenopus tropicalis


Alignment Length:313 Identity:92/313 - (29%)
Similarity:118/313 - (37%) Gaps:112/313 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 KPVKDKKGNEKPPYSYNALIMMAIRQSSEKRLTLNGIYEYIMTNHPYYRDNKQGWQNSIRHNLSL 234
            :|.::...::||||||.:|..|||:.|.||.|.|:.||::||...||||:|.|.||||:|||||.
 Frog     3 RPGRNTYSDQKPPYSYISLTAMAIQSSQEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSF 67

  Fly   235 NKCFVKVPRHYDDPGKGNYWMLDPSAEDVFIGGS------------------------------T 269
            |.||:|:||..|.||||::|.|.||..|:|..||                              .
 Frog    68 NDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVMKSDHLAPSKASDAAQYLQQQ 132

  Fly   270 GKLRRRTTAASRSRL-------------AAFKRSL-----------------IGPMFPGLAAYPQ 304
            .|||....|||.:.|             ::||...                 ...|.|..||||.
 Frog   133 AKLRLSALAASGTHLPQMSTYNLGVSQTSSFKHPFAIENIIAREYKMPGGLAFSTMQPMPAAYPL 197

  Fly   305 FGQFLTYPPTAPSLLASMYQR---------------YN------PFAP--KGGPGHPGLP----- 341
            ..|..|...:..:....||..               |:      |..|  .|....|.:|     
 Frog   198 HNQLTTVGSSIGTGWPHMYSSSMLDTTTPISMGNSDYSVSAYGVPIKPICHGAQTLPAIPVPIKP 262

  Fly   342 -----PGLPGLP--------------GPPGP-----QGPPGPPPPPFVAPPTS 370
                 |.||.||              .|..|     |..|..|.....:|||:
 Frog   263 TLASVPALPALPTHIPAILSNSSPSLSPTSPQTATSQSSPATPSDTLTSPPTA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp2NP_476834.1 Forkhead 180..265 CDD:306709 50/84 (60%)
foxb1NP_001107970.1 FH 13..101 CDD:214627 51/87 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2114
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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