DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp1 and ches1

DIOPT Version :10

Sequence 1:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001116217.2 Gene:ches1 / 555843 ZFINID:ZDB-GENE-040217-1 Length:439 Species:Danio rerio


Alignment Length:269 Identity:75/269 - (27%)
Similarity:123/269 - (45%) Gaps:53/269 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 PYSNSDGELSAS---------EDFDSPSRT---STPMSSAA-ESLSS-----QNNDKL------D 84
            |...::|..|.|         :|.|:...:   ||.:|.|. |.|:|     ::.|.|      .
Zfish     8 PGKKAEGPSSGSVARGLSPLYQDTDAADLSLALSTSLSRAEDEELTSLSWLHESTDLLTSLGQSG 72

  Fly    85 VEFDDELEDQLDEDQESEDGNPSKKQ---KMTAGSDTKKPPYSYNALIMMAIQDSPEQRLTLNGI 146
            :.....::|.....:.|...:|...:   .::.| .::|||||::.||.|||:|:|.:||.:..|
Zfish    73 LRSVSPVQDANGAHEPSPSSSPEPNEPPYHLSTG-PSRKPPYSFSCLIFMAIEDAPSKRLPVKDI 136

  Fly   147 YQYLINRFPYFKANKRGWQNSIRHNLSLNKCFTKIPRSYDDP-GKGNYWILDPSAEEVFIGETTG 210
            |.:::..||||.:...||:||:||||||||||.|:.:..... |||:.|.:||......|     
Zfish   137 YGWILEHFPYFSSAPTGWKNSVRHNLSLNKCFKKVDKDRSQSIGKGSLWSIDPDYRHNLI----- 196

  Fly   211 KLRRKNPGASRTRLAAYRQAIFSPMM---AASPYGAPASSYGYPAVPFAAAAAAALYQRMNPAAY 272
            :..:|.|         |..  :||.:   :.||..:|...:..|..|     .:.||::......
Zfish   197 QALKKTP---------YHP--YSPRLPKPSTSPSASPQQYHSPPLWP-----GSPLYRKNGGVLL 245

  Fly   273 QAAYQQMQY 281
            |...:.:|:
Zfish   246 QVPQRVIQH 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp1NP_476730.1 COG5025 <11..>230 CDD:227358 64/213 (30%)
Forkhead 120..205 CDD:459732 41/85 (48%)
ches1NP_001116217.2 None

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