DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp1 and foxc2

DIOPT Version :10

Sequence 1:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_998857.1 Gene:foxc2 / 407875 XenbaseID:XB-GENE-481382 Length:463 Species:Xenopus tropicalis


Alignment Length:110 Identity:61/110 - (55%)
Similarity:82/110 - (74%) Gaps:2/110 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 PSKKQKMTAGSDTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQNSIRH 170
            |....:..|..|..||||||.|||.||||::|::::|||||||::::|||:::.||:||||||||
 Frog    57 PYHHHQPAAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRH 121

  Fly   171 NLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRRK 215
            |||||:||.|:||....||||:||.|||.:..:|  |....|||:
 Frog   122 NLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMF--ENGSFLRRR 164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp1NP_476730.1 COG5025 <11..>230 CDD:227358 61/110 (55%)
Forkhead 120..205 CDD:459732 53/84 (63%)
foxc2NP_998857.1 FH_FOXC1 66..158 CDD:410818 56/93 (60%)

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