DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp1 and croc

DIOPT Version :10

Sequence 1:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_524202.1 Gene:croc / 40374 FlyBaseID:FBgn0014143 Length:508 Species:Drosophila melanogaster


Alignment Length:334 Identity:93/334 - (27%)
Similarity:133/334 - (39%) Gaps:112/334 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 HHHQYVHPYSNSDGELSASE---------DFDSPSRTSTPMSSAAESLSSQNNDKLDVEFDDELE 92
            |:.|....|.::....:||.         .:|..||  .|.|::|..|.:.:.:|          
  Fly    14 HYAQTAAGYGSASAVAAASSASAAAAAHYAYDQYSR--YPYSASAYGLGAPHQNK---------- 66

  Fly    93 DQLDEDQESEDGNPSKKQKMTAGSDTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYF 157
                                    :..||||||.|||.||||::.::::||||||||::.||||:
  Fly    67 ------------------------EIVKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYY 107

  Fly   158 KANKRGWQNSIRHNLSLNKCFTKIPRSYDDPGKGNYWILDPSAEEVFIGETTGKLRR--KNPGAS 220
            :.||:|||||||||||||:||.|:.|....||||:||.|||.:..:|...:..:.||  |.....
  Fly   108 RDNKQGWQNSIRHNLSLNECFVKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFKKKDVM 172

  Fly   221 RTRLAAY-RQAIFSPMMA--------------ASPYGAPASSY---------------------- 248
            |.:..|. |||:.:..:|              |....|.|:.:                      
  Fly   173 REKEEAIKRQAMMNEKLAEMKPLKLMTNGILEAKHMAAHAAHFKKEPLMDLGCLSGKEVSHAAML 237

  Fly   249 ----------------GYPAVPFAAAAAAALYQRMNPAAYQAAY---------QQMQYQQAPQAH 288
                            |.....|...:...:|   ||..:.:||         ..:...|....|
  Fly   238 NSCHDSLAQMNHLAGGGVEHPGFTVDSLMNVY---NPRIHHSAYPYHLNEDNLATVASSQMHHVH 299

  Fly   289 HHQAPHPAQ 297
            |..|.|.||
  Fly   300 HAAAAHHAQ 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp1NP_476730.1 COG5025 <11..>230 CDD:227358 73/204 (36%)
Forkhead 120..205 CDD:459732 53/84 (63%)
crocNP_524202.1 FH_FOX 69..159 CDD:469596 54/89 (61%)

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