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Protein Alignment slp1 and Foxa3
DIOPT Version :9
Sequence 1: | NP_476730.1 |
Gene: | slp1 / 33607 |
FlyBaseID: | FBgn0003430 |
Length: | 322 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038957314.1 |
Gene: | Foxa3 / 25100 |
RGDID: | 2809 |
Length: | 361 |
Species: | Rattus norvegicus |
Alignment Length: | 144 |
Identity: | 63/144 - (43%) |
Similarity: | 84/144 - (58%) |
Gaps: | 14/144 - (9%) |
- Green bases have known domain annotations that are detailed below.
Fly 120 KPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQNSIRHNLSLNKCFTKIPRS 184
||||||.:||.||||.:|.:.|||:.|||::::.|||::.|::.|||||||:||.|.||.|:.||
Rat 126 KPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARS 190
Fly 185 YDDPGKGNYWILDPSAEEVFIGETTGKLRRK------------NPGASRTRLAAYRQAIFSPMMA 237
.|.||||:||.|.||:..:| |....|||: |...|.||......|..:...|
Rat 191 PDKPGKGSYWALHPSSGNMF--ENGCYLRRQKRFKLEEKAKKGNSATSATRNGTVGSATSATTTA 253
Fly 238 ASPYGAPASSYGYP 251
|:...:||.....|
Rat 254 ATAVTSPAQPQPTP 267
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
slp1 | NP_476730.1 |
FH |
120..205 |
CDD:214627 |
48/84 (57%) |
Foxa3 | XP_038957314.1 |
FH_FOXA3 |
124..225 |
CDD:410814 |
53/100 (53%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000010 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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