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Protein Alignment slp1 and lin-31
DIOPT Version :9
Sequence 1: | NP_476730.1 |
Gene: | slp1 / 33607 |
FlyBaseID: | FBgn0003430 |
Length: | 322 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_494704.1 |
Gene: | lin-31 / 173740 |
WormBaseID: | WBGene00003017 |
Length: | 237 |
Species: | Caenorhabditis elegans |
Alignment Length: | 163 |
Identity: | 60/163 - (36%) |
Similarity: | 82/163 - (50%) |
Gaps: | 40/163 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 117 DTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQNSIRHNLSLNKCFTKI 181
|.:||||||..|..||||||.::.|.|..||:|:::|||:::.|.:.||||:|||||.|.||.||
Worm 10 DEQKPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNSLRHNLSFNDCFIKI 74
Fly 182 PRSYDDPGKGNYWILDPSA-------------------------EEVFIGETTGKLRRKNPGASR 221
||..|.||||:||.:.|:| ::.|......|:.||||
Worm 75 PRRADRPGKGSYWAVHPNASGMFENGSCLRRRKRFRARGGQDDDDDDFHHPAPSKISRKNP---- 135
Fly 222 TRLAAYRQAIFSPMMAASPYGAPASSYGYPAVP 254
.|::...|...|..|..:|.:|
Worm 136 -----------LPLLPEPPITPPLLSSLFPNLP 157
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
slp1 | NP_476730.1 |
FH |
120..205 |
CDD:214627 |
47/109 (43%) |
lin-31 | NP_494704.1 |
FH |
13..101 |
CDD:214627 |
47/87 (54%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0 |
Normalized mean entropy |
S1826 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1270467at2759 |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000010 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R2114 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
5 | 4.900 |
|
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