DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp1 and Foxc1

DIOPT Version :9

Sequence 1:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_032618.2 Gene:Foxc1 / 17300 MGIID:1347466 Length:553 Species:Mus musculus


Alignment Length:263 Identity:89/263 - (33%)
Similarity:119/263 - (45%) Gaps:79/263 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 DTKKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQNSIRHNLSLNKCFTKI 181
            |..||||||.|||.||||::|::::|||||||::::|||:::.||:|||||||||||||:||.|:
Mouse    75 DMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKV 139

  Fly   182 PRSYDDPGKGNYWILDPSAEEVFIG-------------------ETTGKLRRKNPGASRTRLAAY 227
            ||....||||:||.|||.:..:|..                   |..|:|..:.|...:    |.
Mouse   140 PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEKGRLHLQEPPPPQ----AG 200

  Fly   228 RQAIFSPMMAASPYGAPASSYG-------------------YPAVPFAAAAA-----AALYQRM- 267
            ||...:|     |..|..|:.|                   .|..|.:.|||     ||...:: 
Mouse   201 RQPAPAP-----PEQAEGSAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAALGSGSAATVPKIE 260

  Fly   268 ----------------------NPAAYQAAYQQMQYQQAPQAHHHQA----PHPAQMQGYPQQLN 306
                                  .|.:..||......|.||..||.|.    .....::|.||...
Mouse   261 SPDSSSSSLSSGSSPPGSLPSARPLSLDAAEPAPPPQPAPPPHHSQGFSVDNIMTSLRGSPQGSA 325

  Fly   307 AEL 309
            |||
Mouse   326 AEL 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp1NP_476730.1 FH 120..205 CDD:214627 53/84 (63%)
Foxc1NP_032618.2 Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 1..51
FH 78..166 CDD:214627 54/87 (62%)
Nuclear localization signal 1 (NLS 1). /evidence=ECO:0000250|UniProtKB:Q12948 78..93 12/14 (86%)
Nuclear localization signal 2 (NLS 2). /evidence=ECO:0000250|UniProtKB:Q12948 168..176 0/7 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 173..326 31/161 (19%)
Required for transcriptional inhibition. /evidence=ECO:0000250|UniProtKB:Q12948 217..366 23/112 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..393
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..466
Required for transcriptional activation. /evidence=ECO:0000250|UniProtKB:Q12948 466..553
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1270467at2759
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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