DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment slp1 and Foxa3

DIOPT Version :10

Sequence 1:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_032286.1 Gene:Foxa3 / 15377 MGIID:1347477 Length:353 Species:Mus musculus


Alignment Length:202 Identity:42/202 - (20%)
Similarity:80/202 - (39%) Gaps:59/202 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 INEKIDQLKRDTQSIQETNIMFNTTQQLMEKLSQQLQTASKSTEQRLTDLEHRLLDQLPEQSGVY 123
            :|...||.|..|:.:.:    ...|:.|.::|:.     |||.::..         ::.|:|   
Mouse    29 LNSVDDQYKGCTKKMAD----LVKTKYLPKELNN-----SKSFKEAW---------KVAERS--- 72

  Fly   124 FMQPDPAKNASFEVLRDWTNNHG-----FGGNWIVFQRRFNGSVNFYR-NWTEYRQGFGELHGEH 182
            |.:|:          .:.||||.     :.|  :...|.||.:.:..| |:|..:..:..|   |
Mouse    73 FKKPE----------NNLTNNHSIAIYLYTG--LKLFRDFNNATHHGRQNYTNEKYDWYSL---H 122

  Fly   183 WLGLDKLHAIVSTRQHELLIVLEDFDGVVAYAHYDDFKIGNESEKYVIKSVGQYSGTAGDSFSPH 247
            :|..:.|. |:.|.|:..               :|.|: |.:||..::.:..::...|..|:..:
Mouse   123 FLLTEALQ-ILKTTQNRC---------------FDTFR-GTKSEYELLDNTVRFGSFASSSYIRN 170

  Fly   248 KDEAFST 254
            |...|.:
Mouse   171 KAMFFGS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp1NP_476730.1 COG5025 <11..>230 CDD:227358 38/176 (22%)
Forkhead 120..205 CDD:459732 21/90 (23%)
Foxa3NP_032286.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 52..83 10/57 (18%)
FH_FOXA3 117..218 CDD:410814 16/81 (20%)
COG5025 <118..323 CDD:227358 16/80 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 219..287
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.