DRSC/TRiP Functional Genomics Resources

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Protein Alignment slp1 and foxb1

DIOPT Version :9

Sequence 1:NP_476730.1 Gene:slp1 / 33607 FlyBaseID:FBgn0003430 Length:322 Species:Drosophila melanogaster
Sequence 2:NP_001107970.1 Gene:foxb1 / 100125219 XenbaseID:XB-GENE-1018255 Length:322 Species:Xenopus tropicalis


Alignment Length:197 Identity:73/197 - (37%)
Similarity:101/197 - (51%) Gaps:32/197 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 KKPPYSYNALIMMAIQDSPEQRLTLNGIYQYLINRFPYFKANKRGWQNSIRHNLSLNKCFTKIPR 183
            :||||||.:|..||||.|.|:.|.|:.||:::::||||::.|.:.||||:|||||.|.||.||||
 Frog    12 QKPPYSYISLTAMAIQSSQEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNLSFNDCFIKIPR 76

  Fly   184 SYDDPGKGNYWILDPSAEEVFIGETTGKLRRKN-----------PG-----------ASRTRLAA 226
            ..|.||||::|.|.||..::|  |....|||:.           |.           .::.||:|
 Frog    77 RPDQPGKGSFWALHPSCGDMF--ENGSFLRRRKRFKVMKSDHLAPSKASDAAQYLQQQAKLRLSA 139

  Fly   227 Y-RQAIFSPMMAASPYG-APASSYGYPAVPFAAAAAAALYQRMNPAAYQAAYQQMQYQQAPQAHH 289
            . ......|.|:....| :..||:.:   |||.....|...:| |..  .|:..||...|....|
 Frog   140 LAASGTHLPQMSTYNLGVSQTSSFKH---PFAIENIIAREYKM-PGG--LAFSTMQPMPAAYPLH 198

  Fly   290 HQ 291
            :|
 Frog   199 NQ 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
slp1NP_476730.1 FH 120..205 CDD:214627 47/84 (56%)
foxb1NP_001107970.1 FH 13..101 CDD:214627 49/89 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000010
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2114
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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