| Sequence 1: | NP_608809.1 | Gene: | CG3407 / 33606 | FlyBaseID: | FBgn0031573 | Length: | 714 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_648109.1 | Gene: | CTCF / 38817 | FlyBaseID: | FBgn0035769 | Length: | 818 | Species: | Drosophila melanogaster |
| Alignment Length: | 496 | Identity: | 119/496 - (23%) |
|---|---|---|---|
| Similarity: | 182/496 - (36%) | Gaps: | 107/496 - (21%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 228 QAKLDQVFQDVQLNFENFHNISHHVNDVANVGVNMVLHGQATDKLNAVVVNTSSTPNSVPVVD-- 290
Fly 291 --DVEFSDTEDMLEGIRNV--VDKVSIEDTCDE---LVDLELTSSGMTAPWFNNNFRDITFPALL 348
Fly 349 LPGEPP---------------PASSEPATPLLKENPHVGDHMALDFLSPEKADPQEEAKLEKTLS 398
Fly 399 KACEPNEQTLLVAPPAC------------QTPPIPTVPPAN--SSIEQLRRSP------LELS-- 441
Fly 442 -------------------EAFKLEEDDMTDSRPASSFEEGDPDAEEPNECFQMEVLDTSLTEEA 487
Fly 488 ENKTRRKHFCDKCNRDFNSYNALKYHQYTHNQERSHKCDSCERSFYTQSALKAHERTHSGVKPFK 552
Fly 553 CDKCEFQFRQWGDLKYHIISRHSDVKAHMCEFCGKSFSRRYSLVVHRRIHTREKNYACQYCDKTF 617
Fly 618 RASSYLLSHIKVHTGERPYECSICEKKFRVSGDLKRHSRIH 658 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| CG3407 | NP_608809.1 | COG5048 | <494..656 | CDD:227381 | 57/161 (35%) |
| C2H2 Zn finger | 497..517 | CDD:275368 | 3/19 (16%) | ||
| zf-H2C2_2 | 509..534 | CDD:290200 | 11/24 (46%) | ||
| C2H2 Zn finger | 525..545 | CDD:275368 | 8/19 (42%) | ||
| zf-H2C2_2 | 537..562 | CDD:290200 | 12/24 (50%) | ||
| C2H2 Zn finger | 555..574 | CDD:275371 | 6/18 (33%) | ||
| zf-C2H2 | 580..602 | CDD:278523 | 5/21 (24%) | ||
| C2H2 Zn finger | 582..602 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 594..617 | CDD:290200 | 8/22 (36%) | ||
| C2H2 Zn finger | 610..630 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 622..645 | CDD:290200 | 10/22 (45%) | ||
| zf-C2H2 | 636..658 | CDD:278523 | 9/21 (43%) | ||
| C2H2 Zn finger | 638..658 | CDD:275368 | 8/19 (42%) | ||
| CTCF | NP_648109.1 | 23ISL | <116..206 | CDD:293226 | 18/107 (17%) |
| C2H2 Zn finger | 296..316 | CDD:275368 | 3/19 (16%) | ||
| COG5048 | 321..>621 | CDD:227381 | 53/137 (39%) | ||
| zf-C2H2 | 322..344 | CDD:278523 | 9/21 (43%) | ||
| C2H2 Zn finger | 324..344 | CDD:275368 | 8/19 (42%) | ||
| zf-H2C2_2 | 337..361 | CDD:290200 | 12/23 (52%) | ||
| C2H2 Zn finger | 352..373 | CDD:275368 | 7/20 (35%) | ||
| C2H2 Zn finger | 381..401 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 394..415 | CDD:290200 | 8/20 (40%) | ||
| C2H2 Zn finger | 409..429 | CDD:275368 | 4/19 (21%) | ||
| zf-H2C2_2 | 422..446 | CDD:290200 | 11/23 (48%) | ||
| C2H2 Zn finger | 437..457 | CDD:275368 | 8/19 (42%) | ||
| C2H2 Zn finger | 467..485 | CDD:275368 | |||
| C2H2 Zn finger | 496..516 | CDD:275370 | |||
| C2H2 Zn finger | 524..544 | CDD:275368 | |||
| zf-H2C2_2 | 536..561 | CDD:290200 | |||
| C2H2 Zn finger | 552..573 | CDD:275368 | |||
| zf-C2H2 | 587..609 | CDD:278523 | |||
| C2H2 Zn finger | 589..609 | CDD:275368 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | P | PTHR24390 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.100 | |||||