DRSC/TRiP Functional Genomics Resources

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Protein Alignment bark and LOXL3

DIOPT Version :9

Sequence 1:NP_001245864.1 Gene:bark / 33604 FlyBaseID:FBgn0031571 Length:3123 Species:Drosophila melanogaster
Sequence 2:NP_115992.1 Gene:LOXL3 / 84695 HGNCID:13869 Length:753 Species:Homo sapiens


Alignment Length:121 Identity:44/121 - (36%)
Similarity:61/121 - (50%) Gaps:13/121 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly  1071 VRLVGGAGANEGRLQVYLKGRWGTVCDYGWNVLNAALVCHQLGYSLNPQDWRLLRSQLPNAGTSE 1135
            |||.|||...|||::|.....||||||..|::..|::||.:||:.       ..|..|..|...:
Human   307 VRLKGGAHPGEGRVEVLKASTWGTVCDRKWDLHAASVVCRELGFG-------SAREALSGARMGQ 364

  Fly  1136 D---ILMANVRCTLQDRDVTKCRAEYEFENTCSHENDVGLRC---YEGAWAGVRFS 1185
            .   |.::.|||:.|:..:.||..:......|||..|.|:||   |.||...:|.|
Human   365 GMGAIHLSEVRCSGQELSLWKCPHKNITAEDCSHSQDAGVRCNLPYTGAETRIRLS 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
barkNP_001245864.1 SR 191..295 CDD:214555
SRCR 196..294 CDD:278931
CUB 459..552 CDD:238001
Beta_helix 579..752 CDD:289971
SR 1071..1175 CDD:214555 39/109 (36%)
SRCR 1076..1174 CDD:278931 33/100 (33%)
SR 1932..2037 CDD:214555
SRCR 1932..2037 CDD:278931
CLECT 2604..2699 CDD:214480
LOXL3NP_115992.1 SR 45..144 CDD:214555
SR 184..281 CDD:214555
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 290..315 6/7 (86%)
SR 307..407 CDD:214555 38/106 (36%)
SR 417..525 CDD:214555 2/4 (50%)
Lysyl-oxidase like 529..732
Lysyl_oxidase 530..728 CDD:307371
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6743
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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