DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bowl and MSN2

DIOPT Version :9

Sequence 1:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_013751.1 Gene:MSN2 / 855053 SGDID:S000004640 Length:704 Species:Saccharomyces cerevisiae


Alignment Length:127 Identity:33/127 - (25%)
Similarity:50/127 - (39%) Gaps:48/127 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 RRLLRAPGRASRPKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH-R 285
            ||....|.|.|                   :::|......:|:|:.|.||.|:|:|.:||:.| |
Yeast   622 RRKSMTPSRRS-------------------SVVIESTKELEEKPFHCHICPKSFKRSEHLKRHVR 667

  Fly   286 YIHSKEKPFKCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDH 347
            .:||.|:||.|                         |   :|.:.|::..||..|:.||..|
Yeast   668 SVHSNERPFAC-------------------------H---ICDKKFSRSDNLSQHIKTHKKH 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 29/117 (25%)
C2H2 Zn finger 240..260 CDD:275368 1/19 (5%)
zf-H2C2_2 252..277 CDD:290200 8/24 (33%)
C2H2 Zn finger 268..288 CDD:275368 10/20 (50%)
zf-H2C2_2 280..303 CDD:290200 10/23 (43%)
C2H2 Zn finger 296..316 CDD:275368 1/19 (5%)
zf-C2H2 322..344 CDD:278523 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
zf-H2C2_2 336..361 CDD:290200 6/12 (50%)
C2H2 Zn finger 352..372 CDD:275368
MSN2NP_013751.1 COG5048 127..594 CDD:227381
zf-C2H2_4 647..670 CDD:404733 10/22 (45%)
C2H2 Zn finger 649..670 CDD:275368 10/20 (50%)
zf-H2C2_2 661..687 CDD:404364 13/53 (25%)
zf-C2H2 676..698 CDD:395048 8/49 (16%)
C2H2 Zn finger 678..698 CDD:275368 7/47 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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