DRSC/TRiP Functional Genomics Resources

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Protein Alignment bowl and MSN4

DIOPT Version :9

Sequence 1:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_012861.1 Gene:MSN4 / 853803 SGDID:S000001545 Length:630 Species:Saccharomyces cerevisiae


Alignment Length:94 Identity:28/94 - (29%)
Similarity:38/94 - (40%) Gaps:29/94 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   255 IHERTHTDERPYSCDICGKAFRRQDHLRDH-RYIHSKEKPFKCTECGKGFCQSRTLAVHKILHME 318
            |....:...:|:.|..|.|||||.:||:.| |.:||.|:||.|.                     
Yeast   562 IDPNNYDKNKPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACM--------------------- 605

  Fly   319 ESPHKCPVCSRSFNQRSNLKTHLLTHTDH 347
                   .|.:.|::..||..||.||..|
Yeast   606 -------FCEKKFSRSDNLSQHLKTHKKH 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 28/94 (30%)
C2H2 Zn finger 240..260 CDD:275368 1/4 (25%)
zf-H2C2_2 252..277 CDD:290200 7/21 (33%)
C2H2 Zn finger 268..288 CDD:275368 11/20 (55%)
zf-H2C2_2 280..303 CDD:290200 10/23 (43%)
C2H2 Zn finger 296..316 CDD:275368 1/19 (5%)
zf-C2H2 322..344 CDD:278523 6/21 (29%)
C2H2 Zn finger 324..344 CDD:275368 6/19 (32%)
zf-H2C2_2 336..361 CDD:290200 7/12 (58%)
C2H2 Zn finger 352..372 CDD:275368
MSN4NP_012861.1 COG5048 57..622 CDD:227381 24/87 (28%)
C2H2 Zn finger 575..596 CDD:275368 11/20 (55%)
C2H2 Zn finger 604..624 CDD:275368 7/47 (15%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

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