DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bowl and Klf15

DIOPT Version :9

Sequence 1:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster
Sequence 2:XP_006506534.1 Gene:Klf15 / 66277 MGIID:1929988 Length:520 Species:Mus musculus


Alignment Length:333 Identity:90/333 - (27%)
Similarity:125/333 - (37%) Gaps:65/333 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 GSGGSDGGSQNGNGDSRNSSASRIS--AYETQLAYQQHLAGLHGPPPPPPPSHHREISAFVPVLP 116
            ||||..||..:.:|.....|..|.|  ..|....:.:.|:|.......|......||..|:....
Mouse   192 GSGGGSGGIGDSSGPVTWGSWRRASVPVKEEHFCFPEFLSGDTDDVSRPFQPTLEEIEEFLEENM 256

  Fly   117 TGKVR--PGSNS-NYEIIAMMADKRKELALREAAAAAAMLGRGPGGPGGPGVPPPGVLYGPAGVP 178
            ..:|:  |.:.| :.|..:.::.......|...:|........|||..|.|....|  .|||...
Mouse   257 EAEVKEAPENGSRDLETCSQLSAGSHRSHLHPESAGRERCTPPPGGTSGGGAQSAG--EGPAHDG 319

  Fly   179 PPPYL--TGPGPSPTGAGSFPFPPGAAAAAL---------------FPPGLGPGMHAGLDRRLLR 226
            |.|.|  ..|......||:.|..||.|..::               ..|.:.|..:..|..:.:|
Mouse   320 PVPVLLQIQPVAVKQEAGTGPASPGQAPESVKVAQLLVNIQGQTFALLPQVVPSSNLNLPSKFVR 384

  Fly   227 ----------------APGRASR------PK-------KQFICKF--CNRQFTKSYNLLIHERTH 260
                            .||.|..      ||       |...|.|  |::.:|||.:|..|.|.|
Mouse   385 IAPVPIAAKPIGSGSLGPGPAGLLVGQKFPKNPAAELLKMHKCTFPGCSKMYTKSSHLKAHLRRH 449

  Fly   261 TDERPYSCDI--CGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVH-KILHMEESPH 322
            |.|:|::|..  ||..|.|.|.|..||..||..||::|..|.|.|.:|..|:.| |:       |
Mouse   450 TGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPYQCPVCEKKFARSDHLSKHIKV-------H 507

  Fly   323 KCPVCSRS 330
            :.|..||:
Mouse   508 RFPRSSRA 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 41/117 (35%)
C2H2 Zn finger 240..260 CDD:275368 9/21 (43%)
zf-H2C2_2 252..277 CDD:290200 11/26 (42%)
C2H2 Zn finger 268..288 CDD:275368 9/21 (43%)
zf-H2C2_2 280..303 CDD:290200 10/22 (45%)
C2H2 Zn finger 296..316 CDD:275368 8/20 (40%)
zf-C2H2 322..344 CDD:278523 4/9 (44%)
C2H2 Zn finger 324..344 CDD:275368 3/7 (43%)
zf-H2C2_2 336..361 CDD:290200
C2H2 Zn finger 352..372 CDD:275368
Klf15XP_006506534.1 SFP1 <423..505 CDD:227516 34/81 (42%)
C2H2 Zn finger 427..449 CDD:275368 9/21 (43%)
C2H2 Zn finger 457..479 CDD:275368 9/21 (43%)
zf-H2C2_2 471..496 CDD:372612 11/24 (46%)
C2H2 Zn finger 487..507 CDD:275368 8/26 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.