DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bowl and sp2

DIOPT Version :9

Sequence 1:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster
Sequence 2:NP_001093452.2 Gene:sp2 / 556835 ZFINID:ZDB-GENE-080410-1 Length:610 Species:Danio rerio


Alignment Length:96 Identity:36/96 - (37%)
Similarity:50/96 - (52%) Gaps:6/96 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   226 RAPGRASRPKKQFICKF--CNRQFTKSYNLLIHERTHTDERPYSCD--ICGKAFRRQDHLRDHRY 286
            :.||...  |::.||..  |.:.|.|:..|..|.|.||.|||:.|:  .|||.|.|.|.|:.|..
Zfish   512 KKPGEVG--KRKHICHIAGCEKTFRKTSLLRAHVRLHTGERPFVCNWVFCGKRFTRSDELQRHAR 574

  Fly   287 IHSKEKPFKCTECGKGFCQSRTLAVHKILHM 317
            .|:.:|.|:|.:|.|.|.:|..|..|...|:
Zfish   575 THTGDKRFECNKCQKRFMRSDHLTKHYKTHI 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 34/90 (38%)
C2H2 Zn finger 240..260 CDD:275368 7/21 (33%)
zf-H2C2_2 252..277 CDD:290200 13/26 (50%)
C2H2 Zn finger 268..288 CDD:275368 9/21 (43%)
zf-H2C2_2 280..303 CDD:290200 8/22 (36%)
C2H2 Zn finger 296..316 CDD:275368 7/19 (37%)
zf-C2H2 322..344 CDD:278523
C2H2 Zn finger 324..344 CDD:275368
zf-H2C2_2 336..361 CDD:290200
C2H2 Zn finger 352..372 CDD:275368
sp2NP_001093452.2 C2H2 Zn finger 524..546 CDD:275368 7/21 (33%)
COG5048 <529..>584 CDD:227381 23/54 (43%)
zf-H2C2_2 539..565 CDD:290200 13/25 (52%)
C2H2 Zn finger 554..576 CDD:275368 9/21 (43%)
zf-H2C2_2 568..591 CDD:290200 8/22 (36%)
zf-C2H2 582..604 CDD:278523 8/21 (38%)
C2H2 Zn finger 584..604 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2698
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

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