DRSC/TRiP Functional Genomics Resources

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Protein Alignment bowl and LOC549508

DIOPT Version :10

Sequence 1:NP_476883.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster
Sequence 2:XP_031759247.1 Gene:LOC549508 / 549508 XenbaseID:XB-GENE-29098987 Length:1464 Species:Xenopus tropicalis


Alignment Length:344 Identity:99/344 - (28%)
Similarity:149/344 - (43%) Gaps:72/344 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 RASRPKKQFICKFCNRQFTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPF 294
            |....:|.|:|..|.:.|:|.|.|::|:|.||.|:|:.|..|||.|..:::|..|:.:|:.||||
 Frog  1101 RVHTGEKPFMCTECGKNFSKKYGLVVHQRVHTGEKPFMCTECGKRFTEKNYLIIHQTLHTGEKPF 1165

  Fly   295 KCTECGKGFCQSRTLAVHKILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECSSCGKVF 359
            .||||||||.:.|...:|:.:|..|.|..|..|.:.|:.:|.||:|...||..|||.|:.|||.|
 Frog  1166 TCTECGKGFSEKRKCVIHQRVHTGEKPFTCTECGKCFSVKSGLKSHQRIHTGEKPYTCTECGKSF 1230

  Fly   360 RRNCDLRRHALTHAVGEVNSGDYVDVGEEDEARNLSGDEEDSLLEVDSPRQSPVHNLGESGGSGE 424
            ..|..|.||...|.  .:......:.|     ::.|...:.||       ...||       :||
 Frog  1231 TLNSHLVRHQRIHT--GIKPFACTECG-----KSFSAHHKLSL-------HKRVH-------TGE 1274

  Fly   425 K-----------SESERMRLKRKAAIDHEESEEEF------DDFDEEEELQDLPRVH--DLP--- 467
            |           |..:::.|.::.    ...|:.|      ..|.....|....|||  :.|   
 Frog  1275 KPFTCTECGKSFSAHDKLSLHKRV----HTGEKPFTCTECGKSFSAHHMLSLHKRVHTGEKPFTC 1335

  Fly   468 REEDDDFDPEDEEQAEVALVARFQASKAAAT--------SQSSSSV-------GTKPERQGVTHC 517
            .|....|    .:|..:.:..||...:...|        :.:|:.|       |.||  ...|.|
 Frog  1336 TECGKSF----RQQTHLEIHQRFHTGEKLYTCTECGKSFTVNSNLVRHQKIHTGEKP--YTCTEC 1394

  Fly   518 HHEGGETYTMRPHGEKHQE 536
                |:::|:..|..:||:
 Frog  1395 ----GKSFTVNSHLVRHQK 1409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bowlNP_476883.1 COG5048 <232..372 CDD:227381 60/139 (43%)
C2H2 Zn finger 240..260 CDD:275368 8/19 (42%)
C2H2 Zn finger 268..288 CDD:275368 7/19 (37%)
C2H2 Zn finger 296..316 CDD:275368 10/19 (53%)
C2H2 Zn finger 324..344 CDD:275368 7/19 (37%)
C2H2 Zn finger 352..372 CDD:275368 9/19 (47%)
LOC549508XP_031759247.1 C2H2 Zn finger 183..203 CDD:275368
C2H2 Zn finger 210..230 CDD:275368
C2H2 Zn finger 238..258 CDD:275368
C2H2 Zn finger 298..318 CDD:275368
C2H2 Zn finger 326..346 CDD:275368
C2H2 Zn finger 354..374 CDD:275368
C2H2 Zn finger 382..402 CDD:275368
C2H2 Zn finger 410..430 CDD:275368
COG5048 <429..614 CDD:227381
C2H2 Zn finger 438..458 CDD:275368
C2H2 Zn finger 465..485 CDD:275368
C2H2 Zn finger 493..513 CDD:275368
C2H2 Zn finger 521..541 CDD:275368
COG5048 545..949 CDD:227381
C2H2 Zn finger 549..569 CDD:275368
C2H2 Zn finger 577..597 CDD:275368
C2H2 Zn finger 605..625 CDD:275368
C2H2 Zn finger 633..653 CDD:275368
C2H2 Zn finger 661..681 CDD:275368
C2H2 Zn finger 689..709 CDD:275368
C2H2 Zn finger 717..737 CDD:275368
C2H2 Zn finger 745..765 CDD:275368
C2H2 Zn finger 773..793 CDD:275368
C2H2 Zn finger 801..821 CDD:275368
C2H2 Zn finger 829..849 CDD:275368
C2H2 Zn finger 857..877 CDD:275368
C2H2 Zn finger 885..905 CDD:275368
C2H2 Zn finger 913..933 CDD:275368
C2H2 Zn finger 941..961 CDD:275368
COG5048 965..1346 CDD:227381 83/273 (30%)
C2H2 Zn finger 969..989 CDD:275368
C2H2 Zn finger 997..1017 CDD:275368
C2H2 Zn finger 1025..1045 CDD:275368
C2H2 Zn finger 1083..1103 CDD:275368 1/1 (100%)
C2H2 Zn finger 1111..1131 CDD:275368 8/19 (42%)
C2H2 Zn finger 1139..1159 CDD:275368 7/19 (37%)
C2H2 Zn finger 1167..1187 CDD:275368 10/19 (53%)
C2H2 Zn finger 1195..1215 CDD:275368 7/19 (37%)
C2H2 Zn finger 1223..1243 CDD:275368 9/19 (47%)
C2H2 Zn finger 1251..1271 CDD:275368 4/31 (13%)
C2H2 Zn finger 1279..1299 CDD:275368 2/23 (9%)
C2H2 Zn finger 1307..1327 CDD:275368 3/19 (16%)
C2H2 Zn finger 1335..1355 CDD:275368 4/23 (17%)
C2H2 Zn finger 1363..1383 CDD:275368 2/19 (11%)
zf-H2C2_2 1375..1399 CDD:463886 7/29 (24%)
C2H2 Zn finger 1391..1411 CDD:275368 7/23 (30%)
zf-H2C2_2 1403..1427 CDD:463886 3/7 (43%)
C2H2 Zn finger 1419..1439 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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