DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment bowl and Osr2

DIOPT Version :9

Sequence 1:NP_001245861.1 Gene:bowl / 33602 FlyBaseID:FBgn0004893 Length:744 Species:Drosophila melanogaster
Sequence 2:XP_017450351.1 Gene:Osr2 / 315039 RGDID:1305812 Length:312 Species:Rattus norvegicus


Alignment Length:319 Identity:165/319 - (51%)
Similarity:187/319 - (58%) Gaps:55/319 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 SRISAYETQLAYQQHLAGLHGPPPPPPPSHHREISAFVPVLPTGKVRPGSNSNYEIIAMMADKRK 139
            |.:.|..|..|...||.||:|            :|| |..:.......|..:.:||        .
  Rat    22 SFLQAVNTFPAAVDHLQGLYG------------LSA-VQTMHMNHWTLGYPNVHEI--------T 65

  Fly   140 ELALREAAAAAAML-GRGPGGPGGPGVPPPGVLYGP-----AGVPPPPYLTGPGPSPTGAGSFPF 198
            ...:.|.|||..:: .|.|    .|.:|....|:.|     |.|.|..:...|        .|.|
  Rat    66 RSTITEMAAAQGLVDARFP----FPALPFATHLFHPKQGAIAHVLPALHKDRP--------RFDF 118

  Fly   199 -----------PPGAAAAALFPPGLGPGMHAGLDRRLL-RAPGRA---SRPKKQFICKFCNRQFT 248
                       ||.....:...||||..: :||.:... |.|.|.   |:.||:||||||.|.||
  Rat   119 ANLAVAATQEDPPKMGDLSKLSPGLGSPI-SGLSKLTPDRKPSRGRLPSKTKKEFICKFCGRHFT 182

  Fly   249 KSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDHRYIHSKEKPFKCTECGKGFCQSRTLAVHK 313
            ||||||||||||||||||:||||.||||||||||||||||||||||||.||||||||||||||||
  Rat   183 KSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK 247

  Fly   314 ILHMEESPHKCPVCSRSFNQRSNLKTHLLTHTDHKPYECSSCGKVFRRNCDLRRHALTH 372
            .|||:|||||||.|.|:||||||||||||||||.|||.|..||||||||||||||:|||
  Rat   248 TLHMQESPHKCPTCGRTFNQRSNLKTHLLTHTDIKPYSCEQCGKVFRRNCDLRRHSLTH 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bowlNP_001245861.1 COG5048 <232..372 CDD:227381 121/139 (87%)
C2H2 Zn finger 240..260 CDD:275368 17/19 (89%)
zf-H2C2_2 252..277 CDD:290200 22/24 (92%)
C2H2 Zn finger 268..288 CDD:275368 18/19 (95%)
zf-H2C2_2 280..303 CDD:290200 21/22 (95%)
C2H2 Zn finger 296..316 CDD:275368 17/19 (89%)
zf-C2H2 322..344 CDD:278523 18/21 (86%)
C2H2 Zn finger 324..344 CDD:275368 16/19 (84%)
zf-H2C2_2 336..361 CDD:290200 20/24 (83%)
C2H2 Zn finger 352..372 CDD:275368 16/19 (84%)
Osr2XP_017450351.1 C2H2 Zn finger 174..194 CDD:275368 17/19 (89%)
zf-H2C2_2 186..211 CDD:404364 22/24 (92%)
C2H2 Zn finger 202..222 CDD:275368 18/19 (95%)
zf-H2C2_2 214..237 CDD:404364 21/22 (95%)
C2H2 Zn finger 230..250 CDD:275368 17/19 (89%)
COG5048 251..>312 CDD:227381 47/56 (84%)
C2H2 Zn finger 258..278 CDD:275368 16/19 (84%)
C2H2 Zn finger 286..306 CDD:275368 16/19 (84%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 53 1.000 Domainoid score I11040
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000748
OrthoInspector 1 1.000 - - mtm8926
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14196
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

Return to query results.
Submit another query.