DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10019 and slc16a13

DIOPT Version :9

Sequence 1:NP_001368939.1 Gene:CG10019 / 33600 FlyBaseID:FBgn0031568 Length:1159 Species:Drosophila melanogaster
Sequence 2:XP_001920250.3 Gene:slc16a13 / 793210 ZFINID:ZDB-GENE-120907-2 Length:502 Species:Danio rerio


Alignment Length:554 Identity:119/554 - (21%)
Similarity:218/554 - (39%) Gaps:120/554 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 PDGGWGWIICGVSFLVHILTTGLQLSYGLLWFYAVQYLHNTSGIELLGALSWSVSM--------- 494
            |||||||::.|..|::..|..||..|.|:.:...|||..     |...|:||..|:         
Zfish    20 PDGGWGWVVVGALFVISALVFGLIRSLGVFFVEFVQYFD-----ESAQAVSWITSIGLAMQQLMS 79

  Fly   495 ---VATSFVVSLCRKRSIRLLSIVGGLVMPLGILFTSFATEFGQVVFSYGIVFGVGVAMVREAST 556
               .|.|.|.      ..|.:.::||.:..||.:..|.||....:..:.|::.|:|.|:|...:.
Zfish    80 PIGAAASNVY------GTRPVVMMGGFLSGLGFILASQATSLLHLYLTMGLISGLGWALVFTPTM 138

  Fly   557 VMLGNYFKRRRQFVEMVAMSGEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRP 621
            ..:..||.:||.....:..:|.|:....||.:.:..|....||..|.|:..|:......|.:.||
Zfish   139 ASVMQYFTKRRSLAMGLGFTGVGLASFAFSPLFQYLVEAYAWRGALLILGGLSFNMVACGALIRP 203

  Fly   622 ASLYHPQRRAIQHLKNQRKKMREKKPILSQDVESTPKYFFLDISSLKSVTVKILLMTSSVASFGI 686
              |..|:   :........|:.:...:||:..|.    |.|.:.:.:......:.:|...|  |.
Zfish   204 --LGTPK---VAVKTENSTKLNKCSFLLSRIYEC----FELSLLTHRGFVTYAVAITFFNA--GY 257

  Fly   687 YTPMFLMALNAAEQGSDVQELVLLQTFLGISMALGVVIAG--ALLRRCFVIRHFVINTKIVTQLF 749
            :.|...:..::...|....:...:.:..|::..:|.|.:|  :.|.:..::...|:.|       
Zfish   258 FIPYVHLVAHSRHIGFTEYQAAFVISITGVADIVGRVASGWASDLGKIRLLHMLVVWT------- 315

  Fly   750 LSIVALAILFLSFVMGYTGLCILSWLYGIGLG-----GFQYSLKILALERIKLKHFSKAWGFIRG 809
             .::.|:::.:...:.|.||.::|.:||...|     .|....:|:.:||:     ..|.|.::.
Zfish   316 -GLLGLSLMLIPVAVVYAGLLLVSIVYGFCAGAMAPLAFAVVPEIVGIERV-----LGALGLLQL 374

  Fly   810 VESVPVLISVPLTSFLND----YSLKYGRAG---------------YYICSAAAAISGIIIFFIS 855
            :||...|:..||:.:|.|    |::.:..||               ::.|:|..|.|        
Zfish   375 IESAGGLLGAPLSGWLKDSTGTYTVSFIAAGSFLMIGMLIAMTLPYFWSCTAPPAPS-------- 431

  Fly   856 EPQQQHQQQQQQLHHHYQQRNGHLATPTLMRHASARQHRPHLPMDYGYGEYPAPDLLSRSCISLN 920
             |.::..|:                       .||.        |...||..:.:.::.:..|.:
Zfish   432 -PSKKKSQE-----------------------GSAE--------DGLIGESTSSNAINETLCSGD 464

  Fly   921 QMEPYL--QANFC----QRHMLQQQQQQQQQQQH 948
            .: ||.  :...|    ..|.:|:|::..|:..|
Zfish   465 HI-PYSDEEVKVCLSNDATHSVQEQEEIPQEMTH 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10019NP_001368939.1 MFS_MCT_SLC16 444..840 CDD:340910 94/433 (22%)
slc16a13XP_001920250.3 2A0111 11..443 CDD:331689 106/489 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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