DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10019 and slc16a4

DIOPT Version :9

Sequence 1:NP_001368939.1 Gene:CG10019 / 33600 FlyBaseID:FBgn0031568 Length:1159 Species:Drosophila melanogaster
Sequence 2:NP_001074068.2 Gene:slc16a4 / 567144 ZFINID:ZDB-GENE-070112-602 Length:558 Species:Danio rerio


Alignment Length:523 Identity:112/523 - (21%)
Similarity:207/523 - (39%) Gaps:98/523 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 PDGGWGWIICGVSFLVHILTTGLQLSYGLLWFYAVQ--YLHNTSGIELLGALSWSVSMVATSFVV 501
            |||||||::....|||::|..|...::| ::|.|:|  :..::..|..:|::..|:.:.......
Zfish    38 PDGGWGWMVVLHCFLVNVLVMGTLKTFG-IFFVALQDEFGGSSESISWIGSIMSSLRLSGGPLAS 101

  Fly   502 SLCRKRSIRLLSIVGGLVMPLGILFTSFATEFGQVVFSYGIVFGVGVAMVREASTVMLGNYFKRR 566
            ..|.|...|:.||||.|.:..|.||:.|||....:..|.|:|.|:|.|::.:|::|::..||::|
Zfish   102 VACAKLGNRVTSIVGALFVSAGFLFSIFATSVTYLYISMGLVVGLGFALLYQATSVVIVTYFRKR 166

  Fly   567 RQFVEMVAMSGEGVGIAL--FSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRPASLYHP-- 627
            ......:..||.|:..||  |:.:|   :.:..|:..|.|:..|.......|::.||.::.||  
Zfish   167 LATAYSIGRSGMGLTFALAPFTQLL---LDQYAWQGALLILGGLMLNLVASGMLLRPINIRHPAS 228

  Fly   628 --------------------------------------------------QRRAIQHL------- 635
                                                              ::.::.||       
Zfish   229 PISNSTIHKTEKDPLKNNMNGNTPVANGTSKSDSSPPIHKDTLIIKNPVHEQNSLPHLDLKKPTQ 293

  Fly   636 -------KNQRKKMREKKPILSQD-----------VESTPKYFFLDISSLKSVTVKILLMTSSVA 682
                   .:|.|...|...:...|           .|::||  .||.|.||:....|...:...:
Zfish   294 NGVNGTDSSQTKTSPEMNGVSPVDSLLENGRTENVPENSPK--VLDFSLLKNPFFCIYTWSLVFS 356

  Fly   683 SFGIYTPMFLMALNAAEQGSDVQELVLLQTFLGISMALGVVIAGALLRRCFVIR-HFVINTKIVT 746
            ....:.|.|.::..|...|.|..:...:.:..||:..:..:.:|.:..|..|.: |:       .
Zfish   357 QLAYFIPYFHLSARARNLGIDPMDASFIISVAGITETVAQLASGWVTDRNLVHKYHY-------H 414

  Fly   747 QLFLSIVALAILFLSFVMGYTGLCILSWLYGIGLGGFQYSLKILALERIKLKHFSKAWGFIRGVE 811
            :.:|.:..:..|.......|..|.:.:..:.|..||:...|..:.::.:.....:.:.||.....
Zfish   415 KAYLILCGVVNLLSPLATSYILLMVYAVFFAIFCGGYMALLLPVLVDLVGADKLNNSMGFSMFFV 479

  Fly   812 SVPVLISVPLTSFLNDYSLKYGRAGYYICSAAAAISGIIIFF--ISEPQQQHQQQQQQLHHHYQQ 874
            .:..|...||..||.||:..|. ..:|:......:|.|.:|.  ::...|..:::.:.|:.....
Zfish   480 GLGCLTGPPLAGFLYDYTQTYD-CSFYLAGVCYLLSSISLFLEPLARRWQARKERLETLNQELMW 543

  Fly   875 RNG 877
            .||
Zfish   544 SNG 546

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10019NP_001368939.1 MFS_MCT_SLC16 444..840 CDD:340910 100/477 (21%)
slc16a4NP_001074068.2 2A0113 35..520 CDD:273325 107/495 (22%)
MFS 47..520 CDD:119392 100/486 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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