DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10019 and kar

DIOPT Version :9

Sequence 1:NP_001368939.1 Gene:CG10019 / 33600 FlyBaseID:FBgn0031568 Length:1159 Species:Drosophila melanogaster
Sequence 2:NP_001189213.1 Gene:kar / 45883 FlyBaseID:FBgn0001296 Length:612 Species:Drosophila melanogaster


Alignment Length:526 Identity:121/526 - (23%)
Similarity:210/526 - (39%) Gaps:89/526 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   439 PDGG-WGWIICGVSFLVHILTTGLQLSYGLLWFYAVQYL------HNTSGIELLGALSWSVSMVA 496
            |||| ..|::...:||.:.:..|...:||::.......|      ..:|...|:|||:...:.:.
  Fly    74 PDGGARAWLVMVSAFLCNGIIFGFINTYGVIHSLLTDRLTKLGDPEASSKAALIGALAIGTTFLF 138

  Fly   497 TSFVVSLCRKRSIRLLSIVGGLVMPLGILFTSFATE-FGQVVFSYGIVFGVGVAMVREASTVMLG 560
            ::....|..|..:||.:..||::...|:|.:||.|| .|.:.|:|||:||:|.|:....:..:||
  Fly   139 STMAGCLTDKIGLRLTTFAGGVLSAGGLLLSSFCTENIGALYFTYGIMFGLGAALAYTPTLAILG 203

  Fly   561 NYFKRRRQFVEMVAMSGEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRPASLY 625
            :||||....|.....:|..|...:....|.:.:|..|....|:|::.::|.......:|:|   .
  Fly   204 HYFKRYLGKVSGFVTAGSSVFTVILPPCLDKLLGSYGLEGTLRIMSLVSAFIILCSFVYKP---L 265

  Fly   626 HPQRRAIQHLKNQRKKMREKKPILSQDVESTPKYFFLDISSLKSVTVKILLMTSSVASFGIYTPM 690
            ||...     ..::|..|.:..:..:.:        :::...|.....|..:...:|.||.:.|.
  Fly   266 HPPPE-----PPKKKPGRSRINLFLRSI--------INVEIWKRKRFVIWALCVPLALFGYFVPY 317

  Fly   691 --FLMALNAAEQGSDVQELVLLQTFLGISMALGVVIAGALLRRCFVIRHFV-INTKIVTQLFLSI 752
              .:..:.....|.||...|:.   :||:..:|.:|.|       ||.... :|...:.||.|..
  Fly   318 VHMMQFVKTTFPGEDVNLPVMC---IGITSGIGRLIFG-------VIADMPGVNRMYLQQLSLVS 372

  Fly   753 VALAILFLSFVMGYTGLCILSWLYGIGLGGFQYSLKILALERIKLKHFSKAWGFIRGVESVPVLI 817
            :.|..|.|.....|..|...:.:.|:..|.|...|..:|.|.......::|.||:.|:.|:|:.:
  Fly   373 IGLVTLLLPLTNSYVILVSFTLVMGLFDGCFISLLGPIAYEICGPSGATQAIGFLLGLSSIPLTV 437

  Fly   818 SVPLTSFL----NDYSLKYGRAGYYICSAAAAISGIIIFFISEPQQQHQQQQQQL---------- 868
            ..|:...:    |.|:|....||     ....:...::|.|...:::........          
  Fly   438 GPPVAGMIFDSTNSYTLPLILAG-----LPPLLGSSLLFLIKCVKEEENGVSAPRAVVLANGDIE 497

  Fly   869 ---HHHYQQR---------------NGHL-ATPTLMRHASARQHRPHLPMDYGYGEY-----PAP 909
               :.||:..               ||.. |:||:       |...|  :|.|.|.|     |:|
  Fly   498 IAGNGHYRSAGTKSSAPLMGATNGINGSAPASPTI-------QSNGH--VDNGTGSYPDSPWPSP 553

  Fly   910 DLLSRS 915
            ..:|.|
  Fly   554 TRISDS 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10019NP_001368939.1 MFS_MCT_SLC16 444..840 CDD:340910 98/409 (24%)
karNP_001189213.1 MFS 81..459 CDD:119392 96/403 (24%)
MFS_1 124..439 CDD:284993 84/340 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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