DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG10019 and hrm

DIOPT Version :9

Sequence 1:NP_001368939.1 Gene:CG10019 / 33600 FlyBaseID:FBgn0031568 Length:1159 Species:Drosophila melanogaster
Sequence 2:NP_001286141.1 Gene:hrm / 35499 FlyBaseID:FBgn0033028 Length:658 Species:Drosophila melanogaster


Alignment Length:658 Identity:119/658 - (18%)
Similarity:219/658 - (33%) Gaps:250/658 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   382 NHHPSLHATTPHPSHITDEEDSAFPGLADREFHLLHRNIPALRRTGVDTTRIRQYFYPDGGWGWI 446
            |.:.|.|.|.    .:.:::|       |:|:.|    :|                 |||||||:
  Fly    25 NTNESRHKTV----SLINKKD-------DKEYDL----VP-----------------PDGGWGWL 57

  Fly   447 ICGVSFLVHILTTGLQLSYGLL----------------WFYAVQYLHNTSGIELLGALSWSVSMV 495
            :...|.|.:||..|...|:|:|                |..|:.|...:|    ||.:|..:|: 
  Fly    58 VLLGSCLTNILIPGTIKSFGVLFSEFTDAFNSSPTKAAWIPALCYFLYSS----LGPVSSILSV- 117

  Fly   496 ATSFVVSLCRKRSIRLLSIVGGLVMPLGILFTSFATEFGQVVFSYGIVFGVGVAMVREASTVMLG 560
                      |.|.|.::::||....||::.:.:|:....:..|||::.|:|..:....:..::.
  Fly   118 ----------KYSYRTVTLLGGASASLGMILSFWASSIEFLYISYGVLVGIGAGLSFPPTVYIVT 172

  Fly   561 NYFKRRRQFVEMVAMSGEGVGIALFSVILKEGVGKAGWRLGLQIVAALTALSFFMGLMYRPASLY 625
            :||.:.|.....:.:||..:|..:...:|:..:...|:.....|:..:|...|...|.|.|...:
  Fly   173 SYFAKLRGLANGLCISGSALGSIILPPLLRWLLETYGYHGSCLIMGGITLNVFVAALFYEPVEQH 237

  Fly   626 HPQ----RRAIQHLKNQR----------------KKMREKKPILSQDVESTPKYFFLD------- 663
            ..:    |:|::::..:.                |.....||:|..:...:|.|...|       
  Fly   238 MVRVPRARQALENIPEEEDIGIVMKFENVDEPVPKNEPADKPLLPYNSPPSPLYLPGDERLQFVR 302

  Fly   664 --------------------------------------------ISSL------KSVTVKILLMT 678
                                                        .|||      :|.:.|:.|..
  Fly   303 SASAAVVQSYSKSGDEFQSRSRKISTPVRLPQRNQTFTPGQLNSQSSLYAVPEGRSSSNKLTLRN 367

  Fly   679 S----------SVASF-------------------------------------------GIYT-- 688
            |          |.:||                                           |.|.  
  Fly   368 SSKSRLSKRSPSTSSFLYVSTPYHGSTLSFQPKEFSSHLSLRSMGSSGTGHAGDSTGQDGSYADV 432

  Fly   689 ----------------------PMFLMAL--NAAEQGSDVQELVLLQTF---LGISMA-----LG 721
                                  ||:|:.|  |:....|....::||.:|   .|.:.:     |.
  Fly   433 DARGQAQQPQRSKFFDLSLLKDPMYLVILISNSTNAISYTNFIILLPSFGEARGFNKSLSAYLLS 497

  Fly   722 VVIAGALLRRC---------FVIR--HFVINTKIVTQLFLSIVALAILFLSFVMGYTGLCILSWL 775
            ||.|..|:.|.         ::.:  :||..        |||..|::..|.|...|:.:|....|
  Fly   498 VVSATDLIGRIGGSALSDMGYIPKTWYFVGG--------LSISGLSLALLPFAWTYSSVCFWCAL 554

  Fly   776 YGIGLGGFQYSLKILALERIKLKHFSKAWGFIRGVESVPVLISVPLTSF----LNDYSLKYGRAG 836
            :|:..|.:.....::..:.:..:..:.::|....|..:..|:..||.::    :|||:..:...|
  Fly   555 FGLASGIYVGITAVIMADMLGTERLTSSYGISLFVNGLLQLVGPPLCNYWFEAVNDYNPLFHALG 619

  Fly   837 YYICSAAA 844
            ..:.:.|:
  Fly   620 LTLLAGAS 627

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10019NP_001368939.1 MFS_MCT_SLC16 444..840 CDD:340910 104/590 (18%)
hrmNP_001286141.1 2A0113 49..653 CDD:273325 111/619 (18%)
MFS 59..>234 CDD:119392 42/189 (22%)
MFS <449..633 CDD:119392 39/187 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D916876at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11360
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.020

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